Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0962 |
Symbol | |
ID | 5081775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1072981 |
End bp | 1074027 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498087 |
Product | periplasmic binding protein |
Protein accession | YP_001182490 |
Protein GI | 146292066 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTACC AAACCGCGAG TGTTATCAGC ACTATCACGT TAAAATGCAT CACTCAATTG AGATATAACA ATGGATTAAA TCACCTCAAT AATCGGCTAC AACGTCATGC ACATAAATCA CTATCACGCA TTGTAACCAC GGCATTTTTT TCATCGACAC TGGTTTTTTC CGCTATAGGT TTCCCACCTA ATGCCGTGAG CGCCGAGCAA GATATCAGAT TAGTGAGTGC GGGGGCGGGT GTCACTGAAC TGGTACTTGC ACTTGATGCT GGTGATAAAT TAGTTGCCAT CGACTCCACC AGCTATATCC CTGAACAATT GAGCCATGTT GCTAAATTGG GCTACCACAG AATGCTCTCC GCTGAGGGGA TTATCGCGCT TTCCCCCACA CTGGTTATCG GCTCAGATGT GATGGGGCCT GACACTACGC TTAAGGTACT CAAACAGGCC AATATTAAAG TGGTGCGATT ACCCGCAACA ACCGATGAAT CACAGTTAAT GGACAATGTG GATAGATTAG GTCTGTTACT TGATCGCCAA GATAATGCAA CTAAATTAAA ACAGGATTTA CATATACAGC TTCAAAACTT ACACGCTAAA AAACAACAAA TTCACCATGC CACTACCCCG CCTAAAATTC TGTTTATGTT ATTGCAAGAA GGGCGCGGCG CACGAGTTGG CGGAAAAGGT ACCGCGGCAG ATATCATTAT TGAGTTATCC GGTGCGACGA ATATCGCCGA CTTTGAGGGT TATAAAACCC TGTCTCAAGA GGGAATTTTA TCTTTACAAC CCGACATTAT CCTATTGTCA AAACGAAGCG ATACCCCCGA TGAAAAAACC AATGAGCAAA TTACCCAAGA GTTGCTGCAA GAAATGCCCC TAATCGCTCA TACACCTGCA GGTAAAAACG GGCACATTCA AAATCTTGCC GCACAAGCAC TGCTCGGAGG GCTCGGATTA AGTGCAATAA ATGCAGCAGA TACACTTGCT ACGACGCTCA TCAATCATAG TCAACAGTCC CTATCGTTAA TAACACCTTC AAAATAG
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Protein sequence | MLYQTASVIS TITLKCITQL RYNNGLNHLN NRLQRHAHKS LSRIVTTAFF SSTLVFSAIG FPPNAVSAEQ DIRLVSAGAG VTELVLALDA GDKLVAIDST SYIPEQLSHV AKLGYHRMLS AEGIIALSPT LVIGSDVMGP DTTLKVLKQA NIKVVRLPAT TDESQLMDNV DRLGLLLDRQ DNATKLKQDL HIQLQNLHAK KQQIHHATTP PKILFMLLQE GRGARVGGKG TAADIIIELS GATNIADFEG YKTLSQEGIL SLQPDIILLS KRSDTPDEKT NEQITQELLQ EMPLIAHTPA GKNGHIQNLA AQALLGGLGL SAINAADTLA TTLINHSQQS LSLITPSK
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