Gene Sputcn32_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0960 
SymbolhmuV 
ID5081773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1071101 
End bp1071925 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content46% 
IMG OID640498085 
Producthemin importer ATP-binding subunit 
Protein accessionYP_001182488 
Protein GI146292064 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACTA GCCATCTTTC AGCGACGCGT TATTCCAGCA CAGTAGATGC AAAGCGTACT 
CAGTTGAATA TTTGCCAGCT AAATGTATCC ATTGGACAAA AAGCCGTATT ACGGGACATA
AATGTGCAAT TTCAATCAGG CGCAGTTACG GCATTACTCG GCCCTAATGG TGCAGGAAAA
TCAACCTTGC TTAAAGCACT TTGCCAAGAA ATCAGCACGC CTAGGCAATG CATACAACTA
GGTCATAGCC AACTGGTGGA TTGGCCAAGG AGCGATCTGG CAAAATCCTT AGCGGTACTG
CCACAACACG CGAGTTTAAC GTTTCCCTTT AGTGTGACTG AAGTCGTTGC TATGGGGTTA
TACCCCTTAA CTCTCAGTAA AAAAGAAGGG GATATTCTTG TTGAGCAAAA ACTAGCTGAA
GTCGGTTTAA CTCATCTGGC TAAGCGCAGC TATCCAACCC TTTCGGGCGG TGAAAAACAG
CGAGTCCAAC TCGCCCGCGT GTTAACTCAG CTCAGTCAAT CGCCCTTTCC TCCCATACTG
TTATTAGATG AACCGACATC GGCATTAGAT CTCGCCCAGC AGCACAGAGT ACTTGAGTTA
GCGCAAAACT TAGCTCACCA ACAAGCCTAC ACTGTGATAG TAGTACTGCA TGACCTAAAC
CAAGCGGCTC GCTATAGCGA CCAATTAATC GTATTAAAAC AAGGAGAAAT AGTAAGCCAA
GGTACACCAA CTGAAGCGCT ATCGGTAGAT ATCATTCGAG AAGTATGGGA CTACGAGCCT
ATATATGTCC CCGCCCCACA GGGGGGACAT CCACTGATTT TTTAA
 
Protein sequence
MLTSHLSATR YSSTVDAKRT QLNICQLNVS IGQKAVLRDI NVQFQSGAVT ALLGPNGAGK 
STLLKALCQE ISTPRQCIQL GHSQLVDWPR SDLAKSLAVL PQHASLTFPF SVTEVVAMGL
YPLTLSKKEG DILVEQKLAE VGLTHLAKRS YPTLSGGEKQ RVQLARVLTQ LSQSPFPPIL
LLDEPTSALD LAQQHRVLEL AQNLAHQQAY TVIVVLHDLN QAARYSDQLI VLKQGEIVSQ
GTPTEALSVD IIREVWDYEP IYVPAPQGGH PLIF