Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0953 |
Symbol | |
ID | 5081865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1063261 |
End bp | 1064193 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640498078 |
Product | hypothetical protein |
Protein accession | YP_001182481 |
Protein GI | 146292057 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.100703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCC ATACCCCTTA CCTGACATTC GTTTGTCTAC TGATTTGTGT TTTTAGCTGG GGCAGTGTGT TTCCCATTGC TAAGCGAGTG CTGGAGGAGA TGTCGGGAGA ATCCCTCGTT TTCTGGCGGT TTACCATAGC CGCAGTCACG CTGGCGTTAT ATATCGCTTT TACGCGTCAA GCTTGGCTCA AATTGAGCTT GGGGCAATAC ACAGTCATCG CGTTGGTGGG CGTGATTGGT GTTGGTGGTT TAAACCTCGC CTTATTTAAT GGTCTACAAC ACACCTCTGC GGCCAATGGC GCCTTGATTA TGGCACTCAG CCCGCTGGTG ACTTCAATCG TCAACGCACT ATTGCAACGT GAATGGCTCA GCAGGCAACA AGTGTTTAGC TTAGTGGGTG GTTTGGCTGG CGTGCTACTG GTTATCACTA ACGGCAGTTT GCAGCAATTG CTCAATTTTA GTGTTAACCA AGGTGACTTG ATGGTTGCAG CGGGGATGTT CGCTTGGAGT GGTTATACTA TCTGTTCGCA ACGGGTTGGT CATTGGTTAC CAGTGCTGCC ATTTACCTTG CTGAGTATGA TTGCGGCAAG TGTATCTATG TCCGTGGTTG GGCTTGGTCG TGGTGAATTT CATCCTTGGC AGGAGTTGAT GGGACTGTCG ATGATAGCCT TTTCCAGCGT GCTCTACATT GGTCTATTTG CGACTGTGCT GGGTTATTTA TTTTGGATTA ATGGTGTTAA GGCGCTTGGC CCTGCTAAGG CATCGGTCTT TTTCAATCTT GTGCCTGTCT TTGCTGCATT AACTGCTTTA GCCATGGGGC AGGCGGTAAC GGAAATTCAA TTGGTGGGTA TGGCGATAGT GATCCTCGCG TTGATGTTAC CTATGTTGGT TAATCTACGT GCAACAAGAG GCTTAGTAGT TAAGCGTTGT TAA
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Protein sequence | MKSHTPYLTF VCLLICVFSW GSVFPIAKRV LEEMSGESLV FWRFTIAAVT LALYIAFTRQ AWLKLSLGQY TVIALVGVIG VGGLNLALFN GLQHTSAANG ALIMALSPLV TSIVNALLQR EWLSRQQVFS LVGGLAGVLL VITNGSLQQL LNFSVNQGDL MVAAGMFAWS GYTICSQRVG HWLPVLPFTL LSMIAASVSM SVVGLGRGEF HPWQELMGLS MIAFSSVLYI GLFATVLGYL FWINGVKALG PAKASVFFNL VPVFAALTAL AMGQAVTEIQ LVGMAIVILA LMLPMLVNLR ATRGLVVKRC
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