Gene Sputcn32_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0925 
Symbol 
ID5081837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1029132 
End bp1030763 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content43% 
IMG OID640498050 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001182453 
Protein GI146292029 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACA GTATTCGCGT TAAATTTTCC CTTATGTTTA TCATTATGGC CGTGGTGCTC 
ATTGTTATAG CAGTCACAGG AGCAATGCAA AATAGATCAA CACTCAAGCA GATGCAGGAG
TTTAGCCAAT TGTTTAATCC TGCCATTTCA GCCATTTTGA ATGCGGATCG CGATCTTTAC
CAAGCTCAAC TCAGTCAAGA GGTTCTACTT CAAGAGGAAT TAAGTGCTGA AAAACGTAAA
AGTGAAATAG ACAATTGGCA GGAAAATGTC GACCAAGCAA GGGATAGAAT GGGTGAATTC
AAACAAATTC TCAAAAACCA CCCACAAGTA CTGCAATCAA CCAACGGCTT TGAAGCCCAA
TTCTCACTCT GGCATCAAGC CTCATCAGAG GTCATTAATG CTGTTAAAAA TAATGATTTT
GAAAAGGCCA AACAGCTCCA TACCACGAAA GCCAATAAAG AATTTAAATC ATTAAGGAGT
ATTTATAATG CGGCAGGTGA GGCGGCAGAT GATCGAGTCA AAGAACTCGA TTTACTGGCC
TCAGAGCAAG CGACAACGCA AACTAAAGTC TCCATTACCA TTGCCTCTTT GGTCGCCATT
ATTGCCCTTG TACTCGCTTA TTTCGGTCCG AAGATCATAG TGAACGCTAT CCAAGATATT
ACCGATAGGA TCAACGATAT TGTTGATGGC GATGGTAACC TCACCCAAAG GATCCCCATC
AAACGTCAGG ATGAAATCGG TGAACTTGCC ACTGCGTTTA ACCAGTTTGT TGCTCAGCTA
CAAGAAATGG TTATCGCCAT TATCAGCCAA ACCAAAGATG TAAGCCAAAC CGTTGAAAGC
CTAGCGACTA AATCAACAAC AACGATAAAC ATCAGCCATG AACAAGAGCA ATTTGTTGAT
ACCATTGTCA CCGCCGTCAA TGAAATGAGC GCCGCCGTAA GAGAAGTCGC CAGTAATGCA
CTGCATACTG CCACCGAGAT CACTAAGGTC AATGATCAGA CAATTGAAGG AAAAAATATC
CTAGCGCAAT CGGTTAATCA TATTCAGCAA CTTTCTGAAT CCGTTAAAAA TGCAGTCGCG
GTTATTGAAA AACTGTCAGT CAACTCTGCC AATATCGCTT CCGTACTTGA TGTTATCCGC
TCTATTGCAG AACAAACCAA CCTACTTGCG CTTAATGCTG CCATTGAAGC TGCTCGCGCT
GGCGAACAGG GGCGTGGCTT TGCTGTCGTC GCCGATGAAG TACGGACGCT GGCGAGTCGC
ACTGAAACAT CTACCCAAGA TATTCAGCGC ATGATTGAAG AGTTACAACG TGGGGTTAAT
GATGCGGTTA AAAGCATTGA ATCGGGCGCG ACACTTACAA CATCAACGGT GACGCTTGCC
AGTCAAACGC AAGATGCCTT GGATGAAATC CTTAACTCCA CCTCCAAAGT CAGTGAGATG
TCCACTCAAA CAGCCACCGC GACGGAAGAG CAAACTCATG TGACTGAAGA AATTAACCGC
AACTTAACTG AATTATCTGA TAAAACAAGA TACTGTAACT TGGTGATCCA AGAAACTCAG
CAAATTGTGG TTAACACTAA AGCCATTTGC AGCAATCTAC AAAAAGAAGT CGCTCGATTT
AAAGTGGCTT AA
 
Protein sequence
MFNSIRVKFS LMFIIMAVVL IVIAVTGAMQ NRSTLKQMQE FSQLFNPAIS AILNADRDLY 
QAQLSQEVLL QEELSAEKRK SEIDNWQENV DQARDRMGEF KQILKNHPQV LQSTNGFEAQ
FSLWHQASSE VINAVKNNDF EKAKQLHTTK ANKEFKSLRS IYNAAGEAAD DRVKELDLLA
SEQATTQTKV SITIASLVAI IALVLAYFGP KIIVNAIQDI TDRINDIVDG DGNLTQRIPI
KRQDEIGELA TAFNQFVAQL QEMVIAIISQ TKDVSQTVES LATKSTTTIN ISHEQEQFVD
TIVTAVNEMS AAVREVASNA LHTATEITKV NDQTIEGKNI LAQSVNHIQQ LSESVKNAVA
VIEKLSVNSA NIASVLDVIR SIAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRTLASR
TETSTQDIQR MIEELQRGVN DAVKSIESGA TLTTSTVTLA SQTQDALDEI LNSTSKVSEM
STQTATATEE QTHVTEEINR NLTELSDKTR YCNLVIQETQ QIVVNTKAIC SNLQKEVARF
KVA