| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0909 |
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| Symbol | |
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| ID | 5081821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1009072 |
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| End bp | 1010643 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640498034 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001182437 |
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| Protein GI | 146292013 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.710652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCTAG AGTTTAAAAA ACGCCAACTA CTTTATTTTC CTGTTTTATA TCTCAGTGGA
TTATTTATTT TAGGCTATAG CCTTATCCAT TGGTTTTTAC TGCAATTATT TAATGTAGAT
GAAGACCTTG GGTATTTTTG GTTACCTCTG TTGCTTCCCG GTGGATTGTT GTTTTTTTTC
CTTCTGCCTA GGCTTAAACT GCTTAACTTT ACGGGCAGTC ATTCACGCTT TATATATCTT
CTAATTGCTT CAATTTATAT TGCAGTTCCT ACCATCATTG CTCAGGCATA CCTAAAGACG
GTAACGGGCA AGTTAACTCA GCTTGATTCG ATACAGGAAA TTATGCTGCA CCCTCCGACG
CAGTTTTATC AATTAAAACG GTCTTATATC GATAAAACGC AAATCGGTTT ACAGCGTAGC
TTTGAAGTAA CAGGTAGGAG TAATAACAGA CTAACGATCA AGCTGTATAT CGCCATCCCC
ATTTTTGCGA GCGAGGCAGA TAGCCACCGC GCTCCCGCTC TGGCATGGTA TGGCAAAATA
TACCAAGAAG AGATCAGTAA TCGACTCGAA CCTGATGAAA AAGAAGCGCA ATTTCAAGCG
TTCTTAACAC GTATACAAAC CGAGTTTGAC GAGTTTGATC CCCATGCGTT TAATTATTTA
GATCGTCTCG GCCCCTCTTC ACTTTATTCG GATTTGCTCT CTGCCGCGCA AAACAGCCCC
AGCTACCAAG CTGAATATCG GACTATTTTT ATGCCTGCAT TCACTCCCTT TGAGGCGCGA
AATGGTCATA AACTAGCGTG GATTATCGGC TGGCTATTGG TTGGAGCCTT GGTGTGGTAT
GTGATGTTGC GACGGGTCAA ACTGGATGAA GTGGCGTTGA ACTCAGGGGC ATTAGCAAAA
CAATTGGATC ATCGAAATAC CACCTCTGAA TTACAGTCAT GGCTTGAGTT CATCCGCCCT
AAAGCCGGTT TTATGGTCAC GCCAGTACTG ATGTCTCTCA ATGCATTCGT GTTTATCTTT
ATGGCATGGT CAAGCTCGCA TGTTATTCAT TTTCAGAGCC ATTTTTTGCT TGAGTGGGGG
GCTAATTTTC GGCCTAACGT ACTTGCGGGT GAGTGGTGGC GCTTAGTCAC GAGTAGCTTT
ATCCACGGCG GCTTAGCGCA CTTAGTGCTG AATCTTTACG GATTGTTTTT CGTCGGTACC
TTTATTGAGC CTTTGCTGGG TAAATGGCGA CTGTTGTTGG TGTATTTAGT CTCGGGGATT
CTGGCGAGTG TTGCGAGTCT CTGTTGGTAT GATGCCACTA TAAGTGTGGG AGCATCGGGC
GCCATTATGG GACTTTTCGG GATATTAGTG ATTTGGGTTT GGAAGCGGGT TTTTGCTAAA
GAAATTCATT TTATCTTAAG TATCAATGTA GCGATATTTG TCACTGCAAG TGTAGTTTCT
GGTTTTTTGG GTGGCGTTGA CAATGCGGCT CATATTGGCG GATTCGTTAG TGGTTTACTG
CTTGGGTTTC TTTTACTGCC GTATATTCGA AAAACTCAGC CCACTAAAAA ACAAAAGCCG
AGAAGAAAAT AA
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| Protein sequence | MDLEFKKRQL LYFPVLYLSG LFILGYSLIH WFLLQLFNVD EDLGYFWLPL LLPGGLLFFF
LLPRLKLLNF TGSHSRFIYL LIASIYIAVP TIIAQAYLKT VTGKLTQLDS IQEIMLHPPT
QFYQLKRSYI DKTQIGLQRS FEVTGRSNNR LTIKLYIAIP IFASEADSHR APALAWYGKI
YQEEISNRLE PDEKEAQFQA FLTRIQTEFD EFDPHAFNYL DRLGPSSLYS DLLSAAQNSP
SYQAEYRTIF MPAFTPFEAR NGHKLAWIIG WLLVGALVWY VMLRRVKLDE VALNSGALAK
QLDHRNTTSE LQSWLEFIRP KAGFMVTPVL MSLNAFVFIF MAWSSSHVIH FQSHFLLEWG
ANFRPNVLAG EWWRLVTSSF IHGGLAHLVL NLYGLFFVGT FIEPLLGKWR LLLVYLVSGI
LASVASLCWY DATISVGASG AIMGLFGILV IWVWKRVFAK EIHFILSINV AIFVTASVVS
GFLGGVDNAA HIGGFVSGLL LGFLLLPYIR KTQPTKKQKP RRK
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