Gene Sputcn32_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0904 
Symbol 
ID5081915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1004188 
End bp1005177 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content43% 
IMG OID640498029 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_001182432 
Protein GI146292008 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.514729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTG GATTTTTTAG CGCAAAACAA TATGACATAG AATATTTTAA CCGTACCAAT 
GTCGCCTTTG GTGCGCAAAT AGAGTATTTC GATTATCGTC TATGCATGCA AACAGTGAAA 
CTTGCCGAAG GTTTTGACAT CATCTGCGCC TTTGTTAACG ATTCACTCTG CGAAGAAGTA 
CTCGTAGAAC TCGCCAAGGG TGGCACAAAA ATTATTGCCA TGCGCTGTGC GGGCTTTAAC 
AACGTCGATT TAGTCGCTGC TAAACGCTTA GGTATGAAAG TCGTTAACGT GCCCGCCTAT 
TCACCTGAAT CTGTGGCCGA GCACACTGTC GCACTGATGT TGACCTTAAA TCGTAAAATC 
CATAAAGCAT ATCAACGTAC CCGCGATGCT AATTTTTCAC TCGAAGGTTT AGTCGGTTTT 
AATATGTTCG GCAAAACCGT TGGCGTGATT GGTACTGGTA AAATCGGCGT GGCAACCATC 
AAGGTATTAC TCGGTTTTGG CTGTAAAGTC ATTGCGTTTG ATCCTTTTAT TAACCCAGCC 
GTGTTAGCCC TTAATGTGGA ATATCAAGAT CTCGATTCGC TTTATGCCAA CAGCGATATC 
ATCAGCTTAC ATTGCCCGTT AACGGCAGAT AACCATCACT TACTCAATAA AGAAAGCTTC 
GCTAAGATGA AACCCGGGGT GATGGTGATT AACACTAGCC GCGGTGGCTT ACTCAATGCC 
TTTGATGCAA TGGAAGCCTT AAAGCTGGGC CAAATTGGTT CATTGGGGCT TGATGTGTAC 
GAAAATGAAA AGGGGTTATT CTTTGAGGAT AAATCGAATG AAATCATCCA AGACGATGTA 
TTCCGCCGTT TATCTGCTTG CCACAATGTG ATTTTCACTG GGCACCAAGC CTTCCTCACC 
GAAGAAGCCT TAAGTGCTAT CGCTAAAACA ACCTTGAGCA ATCTAAAAGC ACTCAGTGCG 
GGCGAATTGT CAGGTAACGA ATTGTTTTAA
 
Protein sequence
MRIGFFSAKQ YDIEYFNRTN VAFGAQIEYF DYRLCMQTVK LAEGFDIICA FVNDSLCEEV 
LVELAKGGTK IIAMRCAGFN NVDLVAAKRL GMKVVNVPAY SPESVAEHTV ALMLTLNRKI 
HKAYQRTRDA NFSLEGLVGF NMFGKTVGVI GTGKIGVATI KVLLGFGCKV IAFDPFINPA 
VLALNVEYQD LDSLYANSDI ISLHCPLTAD NHHLLNKESF AKMKPGVMVI NTSRGGLLNA 
FDAMEALKLG QIGSLGLDVY ENEKGLFFED KSNEIIQDDV FRRLSACHNV IFTGHQAFLT 
EEALSAIAKT TLSNLKALSA GELSGNELF