Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0844 |
Symbol | |
ID | 5081955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 936650 |
End bp | 937345 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497969 |
Product | two component transcriptional regulator |
Protein accession | YP_001182372 |
Protein GI | 146291948 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000690184 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTTG CCAAGCACAT CTTAGTCGTA GAAGACGATA CCTCTCTGGC AGAGTGGATC AGTGATTATT TACTGGATCA CGGTTACGAG GTGACGGTTG CCAGCCAAGG CGACTTTGCC TTAGAGATGA TAGCCGATGA GACACCTGAC TTAGTGCTAC TCGACGTGAT GATGCCCGTT AAAAATGGTT TCGATGTGTG TAAAGAGGCT AGGGCATTTT ATGCAGGGCC TATTTTATTT ATGACGGCTT GCGTTGAGGA CGGCGATGAA ATCCGCGGGT TAGATGCTGG GGCTGATGAT TACCTGACGA AACCGATCCG GCCACAGGTA TTGTTGGCGC GAATAAAAGC CCTATTACGC CGCGTGGGTG ATGAGGAACA AAAGCTGCAA TTAGTGTTTG ATTCTTTAGT GTTAAATGCG ACGGCAAAAT CAGTCACTAT TGATAAACAG CCGCTGGATT TGAATGCCAA TGAGTTTGAT GTCTTGTGGC TGCTCGCATT GAAAGCGGGC ACGATAGTGA GTCGCAATGA GTTGGTGGCT CAACTGCGGG GCATTGAATA CGATGGTTTG GATCGTTCGA TTGATATCCG TATATCACGC TTACGCAAGA AATTGCAGGA TGCGTTGAGT CAGCCCTATA AAGTCAAAAC CATTCGTGGC AAGGGATATT TATTTTGCCG CGATGAGGTT GAGTAA
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Protein sequence | MSVAKHILVV EDDTSLAEWI SDYLLDHGYE VTVASQGDFA LEMIADETPD LVLLDVMMPV KNGFDVCKEA RAFYAGPILF MTACVEDGDE IRGLDAGADD YLTKPIRPQV LLARIKALLR RVGDEEQKLQ LVFDSLVLNA TAKSVTIDKQ PLDLNANEFD VLWLLALKAG TIVSRNELVA QLRGIEYDGL DRSIDIRISR LRKKLQDALS QPYKVKTIRG KGYLFCRDEV E
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