Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0819 |
Symbol | |
ID | 5081930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 909701 |
End bp | 911116 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497945 |
Product | major facilitator transporter |
Protein accession | YP_001182348 |
Protein GI | 146291924 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTAA CAGGTTCTAT TCAACGCATT CTCGATGCGC TTAGTGTGTA CTATCACAAG CGGGTTTTAA TCCTCCTCTT CCTCGGTTTT TCCGCAGGGC TGCCCTTGAT GCTGGTATTT TCTACTCTAT CATTCTGGTT GCGCGAAGCT GGAGTTGATC GGACATCTAT CGGTTATTTC AGTTGGATAG CCTTAGCATA TGCCTTCAAG TGGGCTTGGT CGCCGCTGGT GGATAGGCTG TCTTTACCCT TATTTACTCG CTTTCTCGGA CGACGACGTA GTTGGATGCT GTTTGCCCAA CTGCTATTAG TGGCCGCTAT TCTTGGCATG TCCTTTAGCG ATCCTTTAAA AGATCTCGAA CGCTTAGCTA TTTTCGCCCT CATGGTCGCC TTTGCTTCAG CCACTCAAGA TATTGTCATT GATGCCTTTA GGATTGAATC GGCACCAGAA AAAATGCAAG CCGCGCTCGC AGCGGCTTAT CAAGTGGGCT ATCGCAGTGC CATGATCGTT GCTACCGCTG GCGCACTCAC CATTGCGGCT TGGGTTGAAC CAGGCAATAC CGAATATAAC TTAGTGGCAT GGCAAACGTC CTACCTAGTG ATGGCAGGAT TAATGTCGGT GGGGATCTTA ACCACCCTTT TTAGCCGCGA GCCCGAAGTG GACACCCGCG CTGCAGATGC CACTGAGCTC GAATTAAAAC AACGTTTAAG CGCAAGTTAT CCTCGACCCA TAGCGGCGAG TATTTCCTGG GTTTATACCG CTAGCGTGCT ACCTTTTATC GACTTTTTTA AACGCTATGG CCGTAGTGCT ATCCTTATTT TGCTACTTAT TTCCTGTTAC CGGATCTCAG ATATTGTGAT GGGGATTATG GCGAACGTTT TCTATGTGGA TATGGGATTC ACAAAGGAAG AAATTGCCTA TCTGAGTAAA ATATACGGCC TTATTATGAC CTTAGTTGGT GCAGCTTTTG GTGGTGTGCT CTTAGCCCGT TTTGGCACGA TGAAAATACT CTTTCTTGGC GCTTTACTGG TGGCGGTCAC TAACCTGTTA TTCGCTTGGC AGGCTGTCAT TGGTTATAAC GTGCCCTTTT TAACCTTTGC AATCTCCGTG GATAACTTCA GCGCTGGTAT CGCCACCGCA GCCTTTATTG CCTATCTATC GAGCCTCACC AGCAACGGCT ACAGTGCAAC TCAATATGCC TTGTTGTCTT CGATCATGCT GCTATTCCCT AAGTTTATTG CTGGTTTTTC GGGTGCTTAT GTCGATTCTT TTGGCTATGT AAACTTCTTT GTTGCCGCCA GCGTCATTGG TTTTCCAGTG TTATTCTTGA TCGCCTTAGT TAACAAATAT GCGCCACACC CCAGCACATC ATTAATGGAT GATGCACAGA TCAAAACCAA GCAATCAGAC AGCTAA
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Protein sequence | MSVTGSIQRI LDALSVYYHK RVLILLFLGF SAGLPLMLVF STLSFWLREA GVDRTSIGYF SWIALAYAFK WAWSPLVDRL SLPLFTRFLG RRRSWMLFAQ LLLVAAILGM SFSDPLKDLE RLAIFALMVA FASATQDIVI DAFRIESAPE KMQAALAAAY QVGYRSAMIV ATAGALTIAA WVEPGNTEYN LVAWQTSYLV MAGLMSVGIL TTLFSREPEV DTRAADATEL ELKQRLSASY PRPIAASISW VYTASVLPFI DFFKRYGRSA ILILLLISCY RISDIVMGIM ANVFYVDMGF TKEEIAYLSK IYGLIMTLVG AAFGGVLLAR FGTMKILFLG ALLVAVTNLL FAWQAVIGYN VPFLTFAISV DNFSAGIATA AFIAYLSSLT SNGYSATQYA LLSSIMLLFP KFIAGFSGAY VDSFGYVNFF VAASVIGFPV LFLIALVNKY APHPSTSLMD DAQIKTKQSD S
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