Gene Sputcn32_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0819 
Symbol 
ID5081930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp909701 
End bp911116 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content47% 
IMG OID640497945 
Productmajor facilitator transporter 
Protein accessionYP_001182348 
Protein GI146291924 
COG category 
COG ID 
TIGRFAM ID[TIGR00901] AmpG-related permease 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTAA CAGGTTCTAT TCAACGCATT CTCGATGCGC TTAGTGTGTA CTATCACAAG 
CGGGTTTTAA TCCTCCTCTT CCTCGGTTTT TCCGCAGGGC TGCCCTTGAT GCTGGTATTT
TCTACTCTAT CATTCTGGTT GCGCGAAGCT GGAGTTGATC GGACATCTAT CGGTTATTTC
AGTTGGATAG CCTTAGCATA TGCCTTCAAG TGGGCTTGGT CGCCGCTGGT GGATAGGCTG
TCTTTACCCT TATTTACTCG CTTTCTCGGA CGACGACGTA GTTGGATGCT GTTTGCCCAA
CTGCTATTAG TGGCCGCTAT TCTTGGCATG TCCTTTAGCG ATCCTTTAAA AGATCTCGAA
CGCTTAGCTA TTTTCGCCCT CATGGTCGCC TTTGCTTCAG CCACTCAAGA TATTGTCATT
GATGCCTTTA GGATTGAATC GGCACCAGAA AAAATGCAAG CCGCGCTCGC AGCGGCTTAT
CAAGTGGGCT ATCGCAGTGC CATGATCGTT GCTACCGCTG GCGCACTCAC CATTGCGGCT
TGGGTTGAAC CAGGCAATAC CGAATATAAC TTAGTGGCAT GGCAAACGTC CTACCTAGTG
ATGGCAGGAT TAATGTCGGT GGGGATCTTA ACCACCCTTT TTAGCCGCGA GCCCGAAGTG
GACACCCGCG CTGCAGATGC CACTGAGCTC GAATTAAAAC AACGTTTAAG CGCAAGTTAT
CCTCGACCCA TAGCGGCGAG TATTTCCTGG GTTTATACCG CTAGCGTGCT ACCTTTTATC
GACTTTTTTA AACGCTATGG CCGTAGTGCT ATCCTTATTT TGCTACTTAT TTCCTGTTAC
CGGATCTCAG ATATTGTGAT GGGGATTATG GCGAACGTTT TCTATGTGGA TATGGGATTC
ACAAAGGAAG AAATTGCCTA TCTGAGTAAA ATATACGGCC TTATTATGAC CTTAGTTGGT
GCAGCTTTTG GTGGTGTGCT CTTAGCCCGT TTTGGCACGA TGAAAATACT CTTTCTTGGC
GCTTTACTGG TGGCGGTCAC TAACCTGTTA TTCGCTTGGC AGGCTGTCAT TGGTTATAAC
GTGCCCTTTT TAACCTTTGC AATCTCCGTG GATAACTTCA GCGCTGGTAT CGCCACCGCA
GCCTTTATTG CCTATCTATC GAGCCTCACC AGCAACGGCT ACAGTGCAAC TCAATATGCC
TTGTTGTCTT CGATCATGCT GCTATTCCCT AAGTTTATTG CTGGTTTTTC GGGTGCTTAT
GTCGATTCTT TTGGCTATGT AAACTTCTTT GTTGCCGCCA GCGTCATTGG TTTTCCAGTG
TTATTCTTGA TCGCCTTAGT TAACAAATAT GCGCCACACC CCAGCACATC ATTAATGGAT
GATGCACAGA TCAAAACCAA GCAATCAGAC AGCTAA
 
Protein sequence
MSVTGSIQRI LDALSVYYHK RVLILLFLGF SAGLPLMLVF STLSFWLREA GVDRTSIGYF 
SWIALAYAFK WAWSPLVDRL SLPLFTRFLG RRRSWMLFAQ LLLVAAILGM SFSDPLKDLE
RLAIFALMVA FASATQDIVI DAFRIESAPE KMQAALAAAY QVGYRSAMIV ATAGALTIAA
WVEPGNTEYN LVAWQTSYLV MAGLMSVGIL TTLFSREPEV DTRAADATEL ELKQRLSASY
PRPIAASISW VYTASVLPFI DFFKRYGRSA ILILLLISCY RISDIVMGIM ANVFYVDMGF
TKEEIAYLSK IYGLIMTLVG AAFGGVLLAR FGTMKILFLG ALLVAVTNLL FAWQAVIGYN
VPFLTFAISV DNFSAGIATA AFIAYLSSLT SNGYSATQYA LLSSIMLLFP KFIAGFSGAY
VDSFGYVNFF VAASVIGFPV LFLIALVNKY APHPSTSLMD DAQIKTKQSD S