Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0751 |
Symbol | |
ID | 5082059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 838761 |
End bp | 840206 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497876 |
Product | major facilitator transporter |
Protein accession | YP_001182280 |
Protein GI | 146291856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0105844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACC CGCTACGCAC TTTCGCCTCT TTATATAGCA CAACGCTCTT AACTGTGTTG GCAGGTGGCT TACTTACCAC TTATTTAGGA CTTAGGCTCT CTGTAGCGAA TGTGCCACAA CTTTGGATTG GTAGCATGAT GTCTGCCTAT TACGTCGGCC TCGTTGCTGG CTCCAAGATA GGGCATAAAC TTATCGCTCA GGTCGGTCAT ATTCGTGCAT TTGTGGCAAG TGCGGGTATC GTTGCGGCAT CGGCATTATG TCACGCTCTC GTTAATGATC TATTTATATG GATACTACTT AGACTTATCG TTGGCATGGG GATGATGTGC CAATATATGG TGCTTGAAAG CTGGTTAAAT GAACAAGCGG AAAATAGTCA ACGTGGCACT GTATTCGCGA GCTACATGAT CGTCTCTTAC TTTGGCTTAA TCCTCGGACA GGGGGCCATT AGTATCTATC CCGAACTGGG TTTAGAACCC TTATTGCTTA TCGCCATTTG TTTTGCACTG TGTATTGTAC CTATTTCACT TACTCGCCGA ATTCATCCTG CGCCACTGAT ACCAGCGCCA CTGCAAATTA CTCATTACTG GAAAAAAGCC CCACAGGCCC TCACCACCAT TGCAATAGGC AGCATGATCG TCGGCTCCTT TTATGGTCTC GCTCCCGCCT ATGCCAGTAA TTTAGGATTA CCACCGGAGA AAGTCGCAAC CTACATGACT GCCACTATCC TTGCAGGACT TTTGGCACAA TGGCCGATGG GCAAACTGTC CGACATTATG CCCCGCAGCA GGCTTATTCG TATCAACTGC GTGCTCCTCG GTATTTTAGC TCTGGGCATT GCACTCACAC CCTATCACCC CGTCATTTCA TTGGTGATGA CTTTCCTTTT TGGGATCCTT GGATTTACTT TTTATCCATT GGCAACAGCC TTAGCTAACT CTCGGGTAGA GCAAAGTGAA CGCGTGGGTT TGTCAGCCAC AATCTTACTC ACCTTTGGTC TGGGTGCCAG TATCGGTCCA TTAATCGCAT CCACCCTAAT GCAATGGCTA GGCAATAACA TGCTCTATGG TTTTATGTCC GCCTGCACGT TAGTACTCTT TTTACGCTTA CGTTATGTCA ACTCACTGCA AAAAACGGAA ACAAATATCA CCCAAGACTA CATAATGGCG ACAGGGGATT TAGTCTCGTC TCCACTGGCT GCAGCACTTG ATCCTCGGGT GGACGTCGAG TCAATTCAGG AGCATATGAC TCCGAATCCA GAAGAATATG AGGATCAAGA AGATTTAGGT GCAGATGCGA TAACGAGTGA TGACGAAGAT GATGATCAAC AACTTGCCTT TAGTTTCGAT ATGGAACCCG TTCGCACTTT CGCCTCACAA ATGGAGACGA TAGTGCCGCT TGATGAACAA GTCTGCGAGA CAAAAGATTT AGCTAAACCT ATTTAA
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Protein sequence | MANPLRTFAS LYSTTLLTVL AGGLLTTYLG LRLSVANVPQ LWIGSMMSAY YVGLVAGSKI GHKLIAQVGH IRAFVASAGI VAASALCHAL VNDLFIWILL RLIVGMGMMC QYMVLESWLN EQAENSQRGT VFASYMIVSY FGLILGQGAI SIYPELGLEP LLLIAICFAL CIVPISLTRR IHPAPLIPAP LQITHYWKKA PQALTTIAIG SMIVGSFYGL APAYASNLGL PPEKVATYMT ATILAGLLAQ WPMGKLSDIM PRSRLIRINC VLLGILALGI ALTPYHPVIS LVMTFLFGIL GFTFYPLATA LANSRVEQSE RVGLSATILL TFGLGASIGP LIASTLMQWL GNNMLYGFMS ACTLVLFLRL RYVNSLQKTE TNITQDYIMA TGDLVSSPLA AALDPRVDVE SIQEHMTPNP EEYEDQEDLG ADAITSDDED DDQQLAFSFD MEPVRTFASQ METIVPLDEQ VCETKDLAKP I
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