Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0716 |
Symbol | |
ID | 5082024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 806093 |
End bp | 806824 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640497841 |
Product | ABC transporter related |
Protein accession | YP_001182245 |
Protein GI | 146291821 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0818834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAA TCACCCTAAG AGCACAAAAT CTCGCGAAGA GCTACAAAAA CCGCCAAGTT GTTAAAGACG TCAGTCTGAC AGTCAAAACC GGCCAAATTG TTGGCTTACT CGGCCCAAAT GGTGCAGGTA AAACCACGAC CTTTTACATG GTGGTTGGGT TAGTAAAAAG CGATAAAGGC CATATTTTTA TCGACAATGA TGATTTAACT GCAGACCCTA TGCATCTTCG CGCCCGCAAA GGAATTGGTT ACTTACCACA AGAAGCCAGT ATCTTCCGTA AGCTGACCGT TCACGACAAT ATCATGGCGG TATTACAAAC CCGTAAAGAG CTAAAAGACG AAGAACGCGA AGAAGAACTG GAACACCTAC TCGAAGAGTT CCATATTACC CATATTCGCG ATAGCCAAGG TATGTCCCTT TCGGGGGGTG AACGTCGCCG AGTTGAGATT GCCCGCGCCC TCGCGGCCAA TCCAAAGTTT ATTCTACTCG ACGAGCCTTT TGCGGGCGTT GATCCGATTT CCGTCATCGA TATCAAAAAA ATTATCGAAC AACTTAAGAG TCGTGGCTTA GGCGTACTTA TCACAGACCA CAATGTCCGA GAAACATTAG ACGTATGTGA ACATGCCTAC ATAGTAAGTC ATGGAAACCT GATTGCCGAG GGAACTCCTG CAGAGATCTT AGACAATCAG CAAGTTAGGG CTGTGTACTT AGGTGAACAA TTCAGGCTAT AG
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Protein sequence | MTQITLRAQN LAKSYKNRQV VKDVSLTVKT GQIVGLLGPN GAGKTTTFYM VVGLVKSDKG HIFIDNDDLT ADPMHLRARK GIGYLPQEAS IFRKLTVHDN IMAVLQTRKE LKDEEREEEL EHLLEEFHIT HIRDSQGMSL SGGERRRVEI ARALAANPKF ILLDEPFAGV DPISVIDIKK IIEQLKSRGL GVLITDHNVR ETLDVCEHAY IVSHGNLIAE GTPAEILDNQ QVRAVYLGEQ FRL
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