Gene Sputcn32_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0713 
Symbol 
ID5082021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp803752 
End bp804195 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content47% 
IMG OID640497838 
ProductPTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_001182242 
Protein GI146291818 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.49351e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTT GTACCATACT GAGGCCGGAG TGCACTACCT GCGCCACTCC GGGCAGTAAA 
AAAAAGGTAC TGGAACTCAT CAGTGACTTA GCCGCTGCCC AGTACCCCAC CCTCTCATCT
CAAGAGATCT TCGAAAGCCT TGTGGCGCGC GAAAAGATGG GGAGCACAGG TATAGGTAAC
GGTATCGCCA TTCCACATGG TCGATTAACC GATATTACAC AACCCATTGC AATACTCGTA
AAATGTGAGG AACCGATAGC TTTCGACGCT ATCGATAAGC AACCTGTTGA TATTTTGTTT
GCACTGCTTG TGCCGGCGGA TCAATGCCAA CAGCACCTAA GCACGTTGTC GTGCATGGCA
GAAAAGCTAA GTGATAAACA AATATTAAAA CAACTGCGTA AGACGCATGA TGAAACGGAA
CTCTATCAGG TAATCACTGG ATGA
 
Protein sequence
MELCTILRPE CTTCATPGSK KKVLELISDL AAAQYPTLSS QEIFESLVAR EKMGSTGIGN 
GIAIPHGRLT DITQPIAILV KCEEPIAFDA IDKQPVDILF ALLVPADQCQ QHLSTLSCMA
EKLSDKQILK QLRKTHDETE LYQVITG