Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0713 |
Symbol | |
ID | 5082021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 803752 |
End bp | 804195 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497838 |
Product | PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_001182242 |
Protein GI | 146291818 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000349351 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTTT GTACCATACT GAGGCCGGAG TGCACTACCT GCGCCACTCC GGGCAGTAAA AAAAAGGTAC TGGAACTCAT CAGTGACTTA GCCGCTGCCC AGTACCCCAC CCTCTCATCT CAAGAGATCT TCGAAAGCCT TGTGGCGCGC GAAAAGATGG GGAGCACAGG TATAGGTAAC GGTATCGCCA TTCCACATGG TCGATTAACC GATATTACAC AACCCATTGC AATACTCGTA AAATGTGAGG AACCGATAGC TTTCGACGCT ATCGATAAGC AACCTGTTGA TATTTTGTTT GCACTGCTTG TGCCGGCGGA TCAATGCCAA CAGCACCTAA GCACGTTGTC GTGCATGGCA GAAAAGCTAA GTGATAAACA AATATTAAAA CAACTGCGTA AGACGCATGA TGAAACGGAA CTCTATCAGG TAATCACTGG ATGA
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Protein sequence | MELCTILRPE CTTCATPGSK KKVLELISDL AAAQYPTLSS QEIFESLVAR EKMGSTGIGN GIAIPHGRLT DITQPIAILV KCEEPIAFDA IDKQPVDILF ALLVPADQCQ QHLSTLSCMA EKLSDKQILK QLRKTHDETE LYQVITG
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