| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0656 |
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| Symbol | |
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| ID | 5080446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 730663 |
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| End bp | 733002 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497781 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_001182185 |
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| Protein GI | 146291761 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGATG TCTTTAAATG TGTGAATGAT GAAGTAGATA TGACAACTAA GACGACAAAA
AAAACACCCG CTCAGCGCAA GGCAAAAAGG AGTCGTGGAC TCTTTGGGCA CATCTGGTCG
CTCACTTGGA AGTTGACTTT AGTAGTGCTT GCCGTAGTCA CTTTTTACAG TATTTATCTT
GATCAAATTA TTGCCAAAAA ATTTGAAGGG CAAAAATGGC ATCTACCCGC CCAAGTATTT
AGCCGGTCCA TGGCCTTGTA CCCCGGTGCT GCCGTCAGTC ATCCTCAGTT AATGGCTGAA
CTTAAATTGC TCGGTTATCG TAAGGTCGCT AATCCTCGCC AAGTCGGTGA ATTTTCAGCT
TCAAGTACGC GTATAGAGTT ATGGCGTAGA CCCTTTTTAC ATCCTGAGGG CGATCAAGCA
GAACAAAGAG TAATGATAAG CTTCGACAGT GACGGTGTAA GTTCCGTCGC GCGGATAGAA
GATAAGCGTC AATTAGCGGT GTTTCACTTA GAACCCGTAT TACTTGATCG TATTATTGCT
GGCGACGGTG AAGACAGGTT ATTTGTGCCA ACCGAAGATA TGCCTAAATT GATTATTCAG
GCATTACTTC TAGTGGAAGA TCGCAGTTTC TATGAACATC ATGGCGTTAA TCCTTTTGCG
ATTCTGCGTG CTGCGTTTGT CAACTTAAGT GCTGGACGAA CAGTACAAGG CGGCTCAACG
CTGACACAGC AGCTTGCAAA AAACTTTTTC TTGTCCAGTG AGCGTTCTTT GCTGCGTAAA
GTGCGGGAAG CACTAATGGC GGTGATTATT GATTTTCGCT ACAGCAAAGA AGAAATCCTC
GAAGCCTATT TAAATGAAGT TTATATGGGG CAGGATAAAT CCCGTGCCAT ACACGGCATG
GGGCTGGCCT CGCAATTTTA TTTTGGACGT CCGATTAGCG AACTGACTGC GCCTCAGCAG
GCATTTCTTG TGGCAGCAAT TAAAGGTCCG TCTTACTACA ATCCGTGGAA ATATCCAGAT
CGTAGTCAAG AAAGACGCGA TCTCGTATTG CGTTTATTGA TGGATGCGGG TGAATTAAAT
ACAGAACAGT ATAAGGCGGC GGTAGAGTCT CCATTGGGCT TACGTAGTCA AAATAAGCCT
GTTCATCAGA AGTTACCTGC TTTCTATGCT TTGGTGAAGC AAGAACTAAA TCAACGTTAT
GGTGATGCTT TACTGAAACA ATCTGGTGTG AAAATTTATA CTACCCTAGA CCCAATGGCC
CAAGAAGCGG CCGAAAATGC GGTGATGAAA ACCTTTAAAA GTTTAGATAA AGGCAATAAA
TCATTGCAGA TTGGTATGGT GGTGACCGAC AAATACACCG GCGGTATTGC CGCAATGGTA
GGCGATAAAA CGCCAGGGTT TGATGGATTT AACCGCGCCG TTGAAATTCG CCGTCCTATT
GGCTCGTTAA TTAAGCCCTT TGTGTACGCG ACGGCATTGG CGCCTAATAG CAAATTCACT
TTGGCGACAC CGTTAAAAGA TCAGCCTATT ACCTTAAAAA ATGAACAAGG TAAAACTTGG
TCTCCCCAAA ACTTCGATAA AAAGTTTAGT GGTCAAGTAT CCCTGTTAAC GGCGTTGAAA
AAATCGATGA ACGTGCCCAC GGTAAACTTG GGGATTGCGG TTGGTGTGGA CGCAGTAGCA
ACCACCCTAG CCAAATCTGG CTGGGAAGAG CCCTTAAACG AATATCCATC GATGTTATTA
GGGGCAGTGA ATGGCTCTCC TCTGATGGTC GCGCAGGTGT ACCAGACCCT AGCGGATAAT
GGGGCTTATC GTAAGCTCAC AACCGTTACT GCAGTATTGG ATAGCCATAA TGAACCTTTG
CCAGTGACCC GTTCACCTAA AGAGCAAGCC ATTACGCCCG AAACAGATTT TCTCGTGCAA
TATGCGATGC AGCAGGTGGT GCGTTCTGGT ACGGCAACAC GGTTAGGTAA TGCTTTCCCT
GGGGTGGCGC TAGCGGGTAA AACGGGAACG AGTAACGATA GCCGTGACTC TTGGTTTGCG
GGGTTTGATG AGCGTAATGT TGCAGCAATT TGGGTCGGAC GGGACGATAA TGGCAAAACT
AGCCTCTATG GTAGTAGTGG CGCCATGGCG GTATATCAAT CCTTCTTAAG TGAGCGACCA
CCAATTGGTT TACGCTCTAT CCCGGTTCCA GGTGTTGTGC GAGGCTATTT TGACCGTGAT
ACCGGCGTCG CTAAAGAAGC GGGTTGTGGC AATGTCGAAG CTCTACCCGC ATTAAAGGGA
ACCTATAATC CTGCACAAAA TTGCGGTGAA CCTTTGCAAT GGTGGCAGAA GATTTTCTAG
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| Protein sequence | MTDVFKCVND EVDMTTKTTK KTPAQRKAKR SRGLFGHIWS LTWKLTLVVL AVVTFYSIYL
DQIIAKKFEG QKWHLPAQVF SRSMALYPGA AVSHPQLMAE LKLLGYRKVA NPRQVGEFSA
SSTRIELWRR PFLHPEGDQA EQRVMISFDS DGVSSVARIE DKRQLAVFHL EPVLLDRIIA
GDGEDRLFVP TEDMPKLIIQ ALLLVEDRSF YEHHGVNPFA ILRAAFVNLS AGRTVQGGST
LTQQLAKNFF LSSERSLLRK VREALMAVII DFRYSKEEIL EAYLNEVYMG QDKSRAIHGM
GLASQFYFGR PISELTAPQQ AFLVAAIKGP SYYNPWKYPD RSQERRDLVL RLLMDAGELN
TEQYKAAVES PLGLRSQNKP VHQKLPAFYA LVKQELNQRY GDALLKQSGV KIYTTLDPMA
QEAAENAVMK TFKSLDKGNK SLQIGMVVTD KYTGGIAAMV GDKTPGFDGF NRAVEIRRPI
GSLIKPFVYA TALAPNSKFT LATPLKDQPI TLKNEQGKTW SPQNFDKKFS GQVSLLTALK
KSMNVPTVNL GIAVGVDAVA TTLAKSGWEE PLNEYPSMLL GAVNGSPLMV AQVYQTLADN
GAYRKLTTVT AVLDSHNEPL PVTRSPKEQA ITPETDFLVQ YAMQQVVRSG TATRLGNAFP
GVALAGKTGT SNDSRDSWFA GFDERNVAAI WVGRDDNGKT SLYGSSGAMA VYQSFLSERP
PIGLRSIPVP GVVRGYFDRD TGVAKEAGCG NVEALPALKG TYNPAQNCGE PLQWWQKIF
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