Gene Sputcn32_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0650 
Symbol 
ID5080440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp722614 
End bp723288 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID640497775 
Producttwo component transcriptional regulator 
Protein accessionYP_001182179 
Protein GI146291755 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.93918e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC TACTCGTTGA AGATAACCCA ATGCTGGTCA ATGAACTGGC AAAGCAACTC 
AAACTTGCTG GCTACGTTAC CGATATCACA GACAAAGCAC TGGAAGCCGA TTACCTCATC
AAAGAAACTC AATATGATTG TGTGATCTTA GATATTGGCC TACCCGATGG TAATGGACTC
GAATTGCTCG AAGGCTGGCG AAATCAAGGT ATTAGTACGC CAGTGATCAT GTTAACGGCT
CGTAGCCAAT GGCATGAAAA AGTCGAAGGT TTTAATGCGG GTGCTGACGA TTACCTAGGA
AAACCTTTCC ATGCTCAAGA GCTGCTTGCT CGCATACAAG CACTGATTCA CCGAGCCCAT
GGACGCTTAA ATACTCCCAG TAAACAACTC ACCTATGGCG GCGTTACCTT AGATGAAACG
GAGCAAACAG TAAAAGTAGC CGATCACCTA TACGAGTTAA CAGCCATGGA ATTTAGATTG
CTTAAGATTT TTCTTATGTC GCCTAAAAAG CTGTTATCTA AAGCACAGCT AACCGATAAA
CTCTATCAAT TTGATGATGA AAAAGAGAGT AACGTCGTAG AAGTTTATGT GACACATCTA
CGTAAAAAAC TCGGTAAAAC CGCTATCGAA ACCCGCCGCG GTCAAGGTTA TATTTTCCAC
GGCGCAATTC AATGA
 
Protein sequence
MKLLLVEDNP MLVNELAKQL KLAGYVTDIT DKALEADYLI KETQYDCVIL DIGLPDGNGL 
ELLEGWRNQG ISTPVIMLTA RSQWHEKVEG FNAGADDYLG KPFHAQELLA RIQALIHRAH
GRLNTPSKQL TYGGVTLDET EQTVKVADHL YELTAMEFRL LKIFLMSPKK LLSKAQLTDK
LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GAIQ