Gene Sputcn32_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0649 
Symbol 
ID5080439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp721289 
End bp722617 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content46% 
IMG OID640497774 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001182178 
Protein GI146291754 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.50109e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCCA TTCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTAATAGT GCTGGGCACA 
GTGATTGGAC TCATCTTATT TGAGTCCATG TTGCGCCAAG CTTTTCACGA TTCGATTATC
AATCGTTTAG AAGAAGATCT TGAACATATC ATGCTGGCGA CCCATATCAA TGATGGTGAT
ATCAGCATAG ATCAAAGCCA GCTTTCCAGT TTTTATAAAC CTGCCTATTC GGGCCGCTAT
TTCCAGCTTA ATCTGCCAAA TGAAGTGATT CGCTCACGTT CATTATGGGA CATGCAATTA
GATATTGAAC CATTAGCCCC AAATCAAACC CGAGTTTGGC AAGCTAAAGG ACCAAAAAAC
AATGATATGC AACTGTTATC CTTGGGATTA AATTCGAGTA GCGCCAATGT CACAGCCACC
CTGACAGTGG CGCAGGATCT CAGTATTGGT AGACGCGTAT TTAGTGAGGT TTATGGCACT
AAACTTGGGG TCAATCTAGC GATGCTAGTA GCGATGATCA TGGGGATCTT TTTAATTCTA
CGTCAGTCTT TTAAACCCGT TAGGCAAATC CAAGATGCGC TATCCCGTTT ACAGCAAGGG
GAGATCAACG CTCTCGAACT GAGTAATATC CCCCCGGAAG TAAGGCCACT AGCAAAAACC
TATAATGAAC TACTCGAATA CACCGCCAAG CAAATTGAAC GTAGTCGCAA TAACTTAGGT
AACTTGAGCC ATGGGCTCAA AACGCCACTG GCGGTGATGC AGCAACAGGT TGAAGCACTT
GGGCTTAAAG ATCCTGAAAC CGCCATAGCC CTGCAGCAGC AACTTGATTC GATTCACAAG
ATGGTCGAGC GTAAACTGGC GGCGGCAAGG ATCACAGGCG ACATGCTTCC TGCGGCGCAA
TTAGTGATCC CAAGGGATTT ACACAGCCTA GCCAATACCC TTAATAAGGT CCACCGCAAC
AAGTCCATCG AATGCAATTT TGAACTCGAT CCCAATATCC TACGGCTGCC GATCCACAGA
GAGGATGGCA TGGAGCTTCT AGGCAACCTA TTAGACAACG CCTTTAAGTG GGCTAAGCAC
CAAGTGAGTA TTCAGCTATC ACGTCAGCAA GAGCGTCTCT GCCTTTGTAT CGATGATGAT
GGCCCTGGGG TTGCTGATGA TGAGCTAGAT AAACTCACAC AGCGGGGAAC AAGATTAGAT
GAAGCTGTAA TGGGTCACGG CTTAGGTTTA TCGATAGTGA AAGAAATTGC CGAGCAATAT
GAGATTGAAC TTAAATTTGA TCACAGCACT CGCTTAGGTG GACTGAGGAT CGAACTGACC
TTTAGCTAG
 
Protein sequence
MISIRTKLSL WLTGLIVLGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHINDGD 
ISIDQSQLSS FYKPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPNQT RVWQAKGPKN
NDMQLLSLGL NSSSANVTAT LTVAQDLSIG RRVFSEVYGT KLGVNLAMLV AMIMGIFLIL
RQSFKPVRQI QDALSRLQQG EINALELSNI PPEVRPLAKT YNELLEYTAK QIERSRNNLG
NLSHGLKTPL AVMQQQVEAL GLKDPETAIA LQQQLDSIHK MVERKLAAAR ITGDMLPAAQ
LVIPRDLHSL ANTLNKVHRN KSIECNFELD PNILRLPIHR EDGMELLGNL LDNAFKWAKH
QVSIQLSRQQ ERLCLCIDDD GPGVADDELD KLTQRGTRLD EAVMGHGLGL SIVKEIAEQY
EIELKFDHST RLGGLRIELT FS