| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0640 |
|---|
| Symbol | |
|---|
| ID | 5080430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 709716 |
|---|
| End bp | 710426 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640497765 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_001182169 |
|---|
| Protein GI | 146291745 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.021198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTC GTGGTGTTAA CAAGGTAATT TTGGTTGGCA ATTTGGGACA AGATCCAGAA
GTGCGTTATA TGCCAAACGG TAATGCAGTC GCAAACATTA CAGTAGCGAC TAGCGAATCG
TGGAAAGACC AACAGGGTCA ACAGCAAGAG CGCACCGAAT GGCACCGTGT GGTTCTGTTC
GGCAAATTAG CTGAAATTAC AGGTGAATAT TTACGTAAAG GTTCACAGGT TTATCTTGAA
GGTAAACTGC AAACTCGTAA GTGGAAAGAC CAAAGCGGTC AAGATCGCTA CAGCACTGAA
GTGGTTATCG ATCAAAGCGG TAGTATGCAA ATGCTAGGTA GCCGTGGTCA AGGTGGTCAA
GCACAAGGTG CGCCAATGGG CGGCGGTATG CCACAAAATG CAGGCTATCA GTCAGCGCCT
CAGCAAGCCG CTCCTGCACA AAATCAGTAT GCGCCAGCGC CTCAAGCAGC ACCTGCTTAC
CAAGCGCCAG TTCAGCAACA ATATGCTCCG CCAGCACCTG CTCAGCAACA AGGTTATGGT
CAGCCACAGG CTCAACAACC ACAACAAGGT GGTTATGCGC CTAAGCCACA AGCCGCTCCT
GCGCCAGCTT ATCAAGCGCC AGCAGCACCA GCACAGCGTC CAGCACCACA GCCACAGCAA
AACTTCACTC CAGATTTGGA TGATGGCTGG GATGACGATA TTCCGTTCTA G
|
|---|
| Protein sequence | MASRGVNKVI LVGNLGQDPE VRYMPNGNAV ANITVATSES WKDQQGQQQE RTEWHRVVLF
GKLAEITGEY LRKGSQVYLE GKLQTRKWKD QSGQDRYSTE VVIDQSGSMQ MLGSRGQGGQ
AQGAPMGGGM PQNAGYQSAP QQAAPAQNQY APAPQAAPAY QAPVQQQYAP PAPAQQQGYG
QPQAQQPQQG GYAPKPQAAP APAYQAPAAP AQRPAPQPQQ NFTPDLDDGW DDDIPF
|
|---|
| |