| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0637 |
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| Symbol | |
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| ID | 5080427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 702738 |
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| End bp | 704660 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497762 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001182166 |
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| Protein GI | 146291742 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCG ATGAAAGAAC TTTCCGTGAA CTCGGCCTGT CCGAGAATTT GTTGCGTGCT
CTTGACGAGC TAGGTTATGA AAAACCCACG CCAATCCAAT CAGCCAGTAT TGATCCACTT
ATGGCTGGCA AAGATATTTT AGGTCAAGCG CAAACAGGTA CAGGTAAAAC TGGCGCCTTC
GCGCTGCCGC TACTTAACAA AGTCACCAGC CAAACTACAC CGCAAATTTT AGTATTAGCG
CCAACGCGTG AATTAGCGGT TCAGGTTGCT GAAGCATTTA GTAGCTATGC CAAATTTATG
AAGAATTTCC ACGTTCTGCC AATTTACGGC GGTCAAAGCA TGCAACAACA GTTGAATGCC
CTGAAACGTG GTCCACAGGT TATCGTGGGT ACGCCAGGTC GTGTTATGGA CCATATGCGT
CGCGGTACCT TGAAACTTGA TTCATTAAAA GCACTCGTGC TTGATGAAGC CGATGAAATG
TTAAAAATGG GCTTCATCGA CGATATCGAA TGGATCCTTG AGCACACGCC AAGCGAGCGC
CAATTGGCGT TATTCTCTGC CACTATGCCA GAGCAAATTA AGCGTGTTGC TAACCAACAT
TTACGCAGCC CTGTGCATGT TCGTATCGAA TCAAGCCAAA CAACGGTTGA ATCAATCGAA
CAGCGTTTTG TGCAAGTGTC ACAACACAAC AAACTTGAAG CTTTAGTACG TGTATTAGAA
GTTGAAAACA CTGAAGGTGT GATCATATTC GTGCGTACTC GTAACTCATG TGTTGAGTTA
GCTGAAAAGT TAGAAGCCCG CGGTTATGCT TCATCACCAC TACACGGTGA CATGAACCAG
CAAGCCCGTG AGCGTGCAGT TGACCAACTG AAACGTGGCA AGTTAGACAT TCTGATCGCG
ACTGACGTTG CGGCCCGTGG TCTTGACGTT GAGCGTATTG GTCACGTTGT GAACTACGAT
ATTCCGTATG ATGCCGAAGC TTATGTGCAC CGTATTGGCC GTACAGGCCG TGCTGGCCGT
ACTGGTATGG CGATCCTGTT TGTGACAAGC CGTGAAATGC GCATGCTGCG CACTATCGAG
CGTTCAACTA ACAGTCGTAT TTCACCAATG AAAATCCCAA GTCCAGAGAC AGTTGCAGAA
CGTCGTCTGT CTCGCTTAGG TGAGCAATTG GCTGAAACCA TCAACGGCGA TTTAGATTTT
ATGAAAGAAG CTGTTGCTCA ATTATGCCAA CAGTTAGAAG TCGATACCGA TCTGCTAGCC
GCAGCCTTGT TACAGCAAGT TCAACAAGAA CGTCCTCTGC AATTGCCAGC AATTCAAGAA
CGCGTTCGTG ATGAACGTAA TGAGCGCAGT GAACGTAGCG ACCGCGGAAG TGATCGTAAT
GACCGTGGTG GTGAGCGTGG TGAACGCAGA AGTCGCGAAC CGCGTCCAAT GCCAGCCAGC
TTAGGCTCAG CTGAAGCGTT GAAAGACAAC CCAGATTTAA AAATGTGTCG TTACGTTATC
GACGTAGGTC GTGAGAATGG TGTGGGTGTG GGTAACATCG TTGGCGCTAT CGCGAACGAA
GCCAACATTG ACAGCCGTTA CATTGGCGCA ATCCAACTTT ACGATGCAGT GACTACCGTT
GACCTGCCAG ACGGCATGCC AAAAGACGTG TTACAGCACC TACGTAAAGT ACGTGTTTGT
GGCAAGCCAT TGAACATCCG CGAAGCTGGC GATCAAGTAT TTGTTGATTC AGGCCGCAGT
GCTCGTTCAG ACCGTCCTGC TGGTGACCGT AAACCACGTG GCGATCGTCC AACGGGTGAC
CGCCCAGCGG GTGATCGTAA GCCTCGCGCT GCGTCTACGG GTGACAAACC ATTTGCTGAT
CGCAAACCAC GTGCAGACAA ACCTGCCGGT GAGCGTAAGC CACGTAAACC ACGTGAAGAC
TAA
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| Protein sequence | MSSDERTFRE LGLSENLLRA LDELGYEKPT PIQSASIDPL MAGKDILGQA QTGTGKTGAF
ALPLLNKVTS QTTPQILVLA PTRELAVQVA EAFSSYAKFM KNFHVLPIYG GQSMQQQLNA
LKRGPQVIVG TPGRVMDHMR RGTLKLDSLK ALVLDEADEM LKMGFIDDIE WILEHTPSER
QLALFSATMP EQIKRVANQH LRSPVHVRIE SSQTTVESIE QRFVQVSQHN KLEALVRVLE
VENTEGVIIF VRTRNSCVEL AEKLEARGYA SSPLHGDMNQ QARERAVDQL KRGKLDILIA
TDVAARGLDV ERIGHVVNYD IPYDAEAYVH RIGRTGRAGR TGMAILFVTS REMRMLRTIE
RSTNSRISPM KIPSPETVAE RRLSRLGEQL AETINGDLDF MKEAVAQLCQ QLEVDTDLLA
AALLQQVQQE RPLQLPAIQE RVRDERNERS ERSDRGSDRN DRGGERGERR SREPRPMPAS
LGSAEALKDN PDLKMCRYVI DVGRENGVGV GNIVGAIANE ANIDSRYIGA IQLYDAVTTV
DLPDGMPKDV LQHLRKVRVC GKPLNIREAG DQVFVDSGRS ARSDRPAGDR KPRGDRPTGD
RPAGDRKPRA ASTGDKPFAD RKPRADKPAG ERKPRKPRED
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