Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0623 |
Symbol | |
ID | 5080413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 687731 |
End bp | 688357 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640497749 |
Product | cytochrome c family protein |
Protein accession | YP_001182153 |
Protein GI | 146291729 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000405798 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA GAACATTCGT CATAGGTCTA ACCCTATGCA GCGGTTATGC AGCCGCCTCT GATGTGCCTT CTGGCAAACA ATCGATGGAC ATTATCCCAC CTGCAGCGCA ACTCTGTGTG TCTTGCCATG GGGCAGAGGG TGAGGGTATT GAACCACTCG GCCCTCGATT AGCGGGATTA TCTAAAGAAT ATATCTCGAC ACAATTGCAG CATTTCCAAG CGGGCGTTCG CCAAAACGCG ACCATGATGC CGATGGCAAT GACGCTCCAA GGTGACGGTA TTGAGCAAGT GTCGAGCTAT TTTTCGGCAA AGCCAACCAC TGACGTCAAG CCCGTTATCC GTGGTGAACA AGTTGTTTTT AATGACGACA CCGCTCGTTT AGCCTATCAA GGTGATTGGT CCCGTGGTTT ACCCGCCTGC GTGACCTGCC ATGGTCCTTC TGCATTAGGT GGCGGCTTAT TTCCTCGCTT AGCAGGTCAA CAGGCGAGTT ATATCAAAAC GCAATTATTG GCGTGGCAGT CGGGAACACG TAAAGGTGAT GTCGATGGCA TGATGGGGAG CGTCGCGAAT AAGCTCACCG TCGCCGAGAT TGATGCGTTA GCCAACTACT TTGCGAATTT AAAATAA
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Protein sequence | MNIRTFVIGL TLCSGYAAAS DVPSGKQSMD IIPPAAQLCV SCHGAEGEGI EPLGPRLAGL SKEYISTQLQ HFQAGVRQNA TMMPMAMTLQ GDGIEQVSSY FSAKPTTDVK PVIRGEQVVF NDDTARLAYQ GDWSRGLPAC VTCHGPSALG GGLFPRLAGQ QASYIKTQLL AWQSGTRKGD VDGMMGSVAN KLTVAEIDAL ANYFANLK
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