Gene Sputcn32_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0610 
Symbol 
ID5080400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp671645 
End bp672262 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content43% 
IMG OID640497737 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001182141 
Protein GI146291717 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTA AGATTGGCCA AAGGGCGGCA CCACAGGGTA GCCATTTTTT ATCTGAGCAG 
TTTAGTGGCT TATCCGAGAA TGTGCAGGAG TGGCAGGAGG TTGAATTTGA GGATTGCGAG 
TTTTTGGATT GCCATTTTAG CGAGAGTACC TTCCGTAAAT GTAAGTTTAT CGAGTGCCGC 
TTTGTGCGCT GTAACTTGAG TTTAGTCAAA GTGCCCCAAT GCCAGTTCAA TGCCGTTGTA 
TTTGAAGAAT GTAAGCTCGT CGGTATAGAT TGGACCCGCG CTGCATGGCC ACGTTTATCC 
TTTGCTGCGC CATTTTCCTT TAAACAATGC ATCCTCAACG ATAGTTCTTT TCTTGGTTTA 
TCCCTCGACG AAATAGTGAT TGAGGAGTGT AAAGCCCACG ATGTGGATTT TCGAGAAGGC 
AGCTTCAATC GAGCCAATTT CACCTACACG GATTTTAGCC ATAGCCTGTT TGGCCGCACT 
CAATTAGCTG ATGCGGATTT CTTTGAAGCG ACAAATTACG ATATTGATAT TTTTAATAAT 
AAAATCAAAG GGGCTAAATT TAGTTGTGAT GAGGCGATTC GTTTGCTCAA TTGTCTCGAT 
ATCGAACTTG TTGATTAA
 
Protein sequence
MAFKIGQRAA PQGSHFLSEQ FSGLSENVQE WQEVEFEDCE FLDCHFSEST FRKCKFIECR 
FVRCNLSLVK VPQCQFNAVV FEECKLVGID WTRAAWPRLS FAAPFSFKQC ILNDSSFLGL 
SLDEIVIEEC KAHDVDFREG SFNRANFTYT DFSHSLFGRT QLADADFFEA TNYDIDIFNN 
KIKGAKFSCD EAIRLLNCLD IELVD