| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0599 |
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| Symbol | rimO |
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| ID | 5080637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 658973 |
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| End bp | 660391 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497726 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001182130 |
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| Protein GI | 146291706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTTG AAACGTTTAA ACCCAAGCAA ACAACCACGC TTGATACCCC AGCAAAAAGA
TTAGAAGCAG CAAGCACTAA TGCTGTGACC ACTGGGAATC GCATCGGTTT CGTGTCTTTG
GGCTGCCCAA AAAACCTCGT GGATTCAGAG CGTATTCTGA CTCAGTTACG CATCGACGGC
TACGAAGTGA CTAACAGCTA CGACAATGCC GACTTAGTTA TCGTCAATAC CTGCGGCTTT
ATCGATGCTG CGGTGGAAGA ATCTCTGGAC GCTGTACGTG AAGCCTTAGA AGAAAACGGC
AAAGTGATCG TCACTGGCTG CCTTGGCGCC AAAGAAAACC AAATCCGCGA AGTATATCCA
GATGTATTAG AAATCACTGG CCCACACAGC TACGAAGCGG TGTTAAAGCA CGTTCACAAA
TATGTGCCTA AGCCAGAGCA CAACCCTTTC ACCTCGTTAA TCCCACAAAC TGGGGTTAAG
TTAACGCCTA AGCATTACGC TTATTTAAAG ATTTCAGAAG GTTGCGACAA CCGTTGTACT
TTCTGCATCA TTCCTTCGCT ACGTGGCGAT CTCAACAGCC GCCCAGCGGG CAGCATCCTA
GATGAAGCTA AGCGTTTAGT GGAATCAGGC GTACAAGAAA TTCTAGTTGT AAGCCAAGAC
ACCTCAGCCT ACGGCAAAGA CAAAAGCGGT CGTACCGATT TTTGGGACGG CATGCCAGTC
AAGCAAGACA TTACTAGCCT AGCGCGCCAA CTGGGTAAAA TGGGCGCTTG GGTGCGTCTG
CATTACATCT ATCCATACCC ATGGGTTGAC GATTTGATCC CGCTAATGGC CGAAGGTTTA
ATCCTGCCGT ATTTGGATAT TCCAATGCAG CATGCTAGCC CACGTATCCT GAAGATGATG
AAGCGTCCAG GCCGTGTTGA CCGTCAGTTA GAAGCGATTC AACGCTGGCG TGAAATCTGC
CCAGATCTAG TGATCCGCTC GACCTTCATC GTTGGCTTCC CAGGTGAAAC CGAAGAGGAT
TTCCAAATCC TGCTCGATTT CTTAAAAGAA GCTCGTCTCG ATCGCGTAGG TTGCTTTAAA
TATTCTGAAG TCGATGGCGC TGTCGCCAAC ACCATAGCCG AGCTTATCAG CGAAGACGTT
AAAGAAGACA GATACCACAG ATTTATGGAA CTCCAAGCCG AGATCAGCGC CGAGCGTTTA
GCCCGTTTCG TTGGCCGTAC TTTAGATATT CTGATTGATG ATGTAGACGA AGAAGGCGCC
ATTGGCCGCA GCTTCGCCGA TGCACCAGAA ATCGACGGCA TGGTGTTTAT CAATGGTGAA
ACTGAGCTGG AACCCGGTAT GTTGGTTCGT GCCCGCATCA CCCATTCAGA CGAACACGAT
CTATGGGCCG AAGTAGTCGA CGCTGACACC CAAGACTAA
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| Protein sequence | MTVETFKPKQ TTTLDTPAKR LEAASTNAVT TGNRIGFVSL GCPKNLVDSE RILTQLRIDG
YEVTNSYDNA DLVIVNTCGF IDAAVEESLD AVREALEENG KVIVTGCLGA KENQIREVYP
DVLEITGPHS YEAVLKHVHK YVPKPEHNPF TSLIPQTGVK LTPKHYAYLK ISEGCDNRCT
FCIIPSLRGD LNSRPAGSIL DEAKRLVESG VQEILVVSQD TSAYGKDKSG RTDFWDGMPV
KQDITSLARQ LGKMGAWVRL HYIYPYPWVD DLIPLMAEGL ILPYLDIPMQ HASPRILKMM
KRPGRVDRQL EAIQRWREIC PDLVIRSTFI VGFPGETEED FQILLDFLKE ARLDRVGCFK
YSEVDGAVAN TIAELISEDV KEDRYHRFME LQAEISAERL ARFVGRTLDI LIDDVDEEGA
IGRSFADAPE IDGMVFINGE TELEPGMLVR ARITHSDEHD LWAEVVDADT QD
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