Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0582 |
Symbol | |
ID | 5080620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 635694 |
End bp | 637088 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640497709 |
Product | outer membrane efflux protein |
Protein accession | YP_001182113 |
Protein GI | 146291689 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAT CACGAGTGGC TTGGCTGTGT TTACTGTCAG TGCCTTTTTT ATTGCCATCG GCTTTGCATG CAGAGCCGAT AAGCTTCAGT GACGCTTGGC AACAAGTGCT GAAGGTGAGC GATAAGCTAC AGGCGCAGTC GCAGGAAGTT AACCGTGCTA AAGGCGAGCA GCAGGCCGGA GAGGGGTTAA ACTTACCCTC CTTAGATATT CGCGGTAACT ATATTCATTT GGATAAACCG ATAGAGTTTG ATTTGAAAGA ATTAAATTCA GTGGTTTCTA TTCCACCAGC CCTTGGCGGC ATCATCGCGG GTATTCCGCC ACTGCCCTTA AGTGAGCAAG ATATTTTTAG TGCGAGCTTG CAGGCAATGT GGCCGATTTA TACGGGTGGG CAGATCACGG CCGCTCAAGG TATACACGCG GCCATGGTGG CCGAAAAACA ACAAGAATTA CAATTAGCCA CCCGCGATTT ATTTACCCAG TTGGTGGACA GATATTATGC TGTCGATGTG ACTCAGGCAT TAGTTGAGAC CCAAACCGAT CTGGTTGGCT CCTTAACAAA GCATGTTGAA CATGCTCTAG CAATGGAGCG CGAAGGGCAA ATTGCGAAGG TTGAGCGCCT CAATGCTCAG GTCGCTTTAG ATAATGCTAA AGTCAATTTA GGTAGTGCCC GCCGCCAACA TGAAATGGCT GTTATCGCGC TGGCTCGTAT GCTCCAGCAA AGTCAGGTGA GTACCCATTC CTCTTTATTC GTACTGCCGC ACGCTCCATC GTTAGATCAA CTTAGCCAAA TGACCTTAAG CCAACATCCA GCACTCAAAT TGCTCGAAGC GAAAGAAGCG CAAGCGAATG GTTTAGTATC ATTAGAAAAG GGGAAATACC ACCCAACGGT ATTCCTCTTT GGTAATTACA CCTTGTATGA AGAAGATACA CTCTTATCGA GCATTACGCC TGATTGGATG GTTGGTGTCG GGGTTAATGT GCCGCTGATC AGCCGTGATG GCCGCAGCGG TAAGGTCGAA GCAGCGAAAA GTGCCCTACT GCAAGCCCGC TATACCAAGG CACAAACCAA GCAAGACTTA AGCCTGCTGG TGGATCAAAG CTATCGCCAA TTATTACAGG CCGAAGAAGA AGTGAAGGCG CTTGATACCT CACTCGAGCT TGCGACCGAA AATCTGCGGC TTAGGGAGAT TGCTTTTAAT CAAGGGCTTT CCACTTCTAT CGACCGAGTC GATGCCGAGC TAAAACTGAG CGCAGTGAAA ACCCAGCAAT TGGCTGCCCG TTATCGTTAT GTGCAAGCCT ATGCCAGATT GATGGCAATC AGTGGTCAAT TAGATGAATT TATTGGTCGT ACCGTCGATC GTCACCCAGT GCAGGAGATA AATCATGCGC GCTAA
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Protein sequence | MKRSRVAWLC LLSVPFLLPS ALHAEPISFS DAWQQVLKVS DKLQAQSQEV NRAKGEQQAG EGLNLPSLDI RGNYIHLDKP IEFDLKELNS VVSIPPALGG IIAGIPPLPL SEQDIFSASL QAMWPIYTGG QITAAQGIHA AMVAEKQQEL QLATRDLFTQ LVDRYYAVDV TQALVETQTD LVGSLTKHVE HALAMEREGQ IAKVERLNAQ VALDNAKVNL GSARRQHEMA VIALARMLQQ SQVSTHSSLF VLPHAPSLDQ LSQMTLSQHP ALKLLEAKEA QANGLVSLEK GKYHPTVFLF GNYTLYEEDT LLSSITPDWM VGVGVNVPLI SRDGRSGKVE AAKSALLQAR YTKAQTKQDL SLLVDQSYRQ LLQAEEEVKA LDTSLELATE NLRLREIAFN QGLSTSIDRV DAELKLSAVK TQQLAARYRY VQAYARLMAI SGQLDEFIGR TVDRHPVQEI NHAR
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