Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0546 |
Symbol | |
ID | 5078072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 593237 |
End bp | 594172 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640497673 |
Product | band 7 protein |
Protein accession | YP_001182077 |
Protein GI | 146291653 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000115645 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTGT TTACCTTAAT TATTTTATTT GTTTTATTTA TTCTCTACAA ACTAATGCTA ATAGTGCCAA TGCGTGAAGT TCACGTTATT GAGCGATTAG GGAAGTTTCG TACCGTATTG CAGCCGGGTT TTCATTTTCT AATCCCGTTT TTTGACCGTG TCGCCTATCG TCACGATACC CGTGAGCAAG TACTTGATGT GCCACCACAA AGTTGTATTT CTAAGGATAA TACTCAGCTT GAGGTGGATG GTCTTGTTTA TCTTAAGGTA ATGGATGGAA AACTGGCGAG TTATGGTATT GAAAACTACC GTAAAGCAGC GGTAAACCTC GCTCAGACAA CGATGCGTTC TGAAATTGGT AAGTTAACCT TAAGTGAAAC TTTTTCTGAG CGTGATAGTT TGAATGAATC CATAGTACGC GAGATTGATA AGGCTTCTGA GCCTTGGGGG ATCAAAGTAT TACGTTATGA AATTCGTAAT ATTACCCCAT CACGCCATGT GATCCATACC CTAGAAAAGC AAATGGAAGC CGAGCGTCGC AAACGCGCTG AAATCACCTT AGCCAATGCG GAAAAAGCGG CAATGATCAA TATGTCCGAA GGTGAGCGTC AAGAGGCCAT CAACCTTTCT GAAGGGCAAA AACAGAAACG GATTAATGAA GCCAAAGGTA CGGGACAGGA GATTGCTATC ATTGCTAAGG CGAAATCGGA GGGGATGGCA ATGATCTCTC AAGCATTAGC GGTTAATGGT GGTACTGATG CGATGAATAT GTTGTTAAAA GAGCAGTTTA TCGCTCAAGT TGGCAAGATA CTTAATGATG CACAAGTATC GGTAGTCCCC GCCGAAATGG CGAAGCTCGA AGGTTTCTTC GAGGGCATGG AGCAGGTCAC TCACACTATG AGTGGTCAAA ATACAGTAAG TAAAGGAGCG CGTTAA
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Protein sequence | MFLFTLIILF VLFILYKLML IVPMREVHVI ERLGKFRTVL QPGFHFLIPF FDRVAYRHDT REQVLDVPPQ SCISKDNTQL EVDGLVYLKV MDGKLASYGI ENYRKAAVNL AQTTMRSEIG KLTLSETFSE RDSLNESIVR EIDKASEPWG IKVLRYEIRN ITPSRHVIHT LEKQMEAERR KRAEITLANA EKAAMINMSE GERQEAINLS EGQKQKRINE AKGTGQEIAI IAKAKSEGMA MISQALAVNG GTDAMNMLLK EQFIAQVGKI LNDAQVSVVP AEMAKLEGFF EGMEQVTHTM SGQNTVSKGA R
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