| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0541 |
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| Symbol | |
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| ID | 5078067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 588679 |
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| End bp | 589854 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640497668 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001182072 |
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| Protein GI | 146291648 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0699456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT TTCAATCTAT TGATGTTGCT GATTATTATG ATATGGACAC ATTCAAACGT
ATTGAAGCGT TTGCCAAAGA CAAAGCAACC CCGTTCGTGG TGATCGATAC CAGTATCATT
GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTATG CCAACGTTTA TTATGCAGTC
AAGGCAAACC CTGCGGCCGA GATCTTATCT TTATTAAAAG ATAAAGGGTC CAACTTTGAT
ATCGCCTCGA TCTATGAGCT AGATATGGTC ATGAATGTCG GTGTTACTGC CGACCGTGTG
AGTTACGGCA ATACCATTAA GAAACGCCAA GATGTGCGAG CATTTTATGA GCGTGGCGTG
CGTATGTATG CATCTGACTC AGAAGCCGAT TTACGCATGA TCGCCGAAGA AGCACCAGGT
TCTCGCATTT ATGTCCGCAT TCTAACCGAA GGGACAGACA CTGCCGATTG GCCGTTATCC
CGTAAATTCG GCTGCCAAAA TGAGATGGCC TATGAGCTAT TGGTATTGGC GCAGGAACTC
GGATTAGAAC CCTATGGTAT TTCATTCCAT GTGGGTTCAC AGCAGCGCGA TATCGGCGCT
TGGGATTCTG CGATTGGCAA AGTGAAAAGC ATTTTTGACC GTCTGCGCGA TGAGCACAAT
ATCACGCTGA AAATGATCAA TATGGGTGGT GGTTTTCCTG CTAACTATAT TGATAAAACC
AATCAGTTGG GTGTGTATGC CGAGCAGATC ACTCACTTCC TGAAGGAAGA TTTTGGTGAT
GATTTACCGC AAATTATTCT GGAGCCGGGC CGTTCATTGA TTTCTAATGC GGGCATTTTA
GTGTCTGAAG TGGTGCTGAT CAGTAAAAAA TCCTACACAG CCTTAGAGCG TTGGGTGTTT
ACCGATGTGG GCAAGTTCTC GGGTTTAATT GAAACCATGG ACGAGGCGAT TAAGTTTCCA
ATTTATACCG AGAAAAAGGG TGAGTTGGAT AAATGTGTCA TTGCTGGGCC AACCTGTGAC
AGTGCCGATA TTATGTATGA GCACTACAGC TATGGTTTAC CGAATGACTT AGCCATTGGT
GATCGTATGT ATTGGTTAAC CGCAGGGGCT TATACCACCA CTTATTCAGC GGTATGTTTT
AATGGTTTTC CACCGCTGAA AGATTATTAT TTATAA
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| Protein sequence | MSQFQSIDVA DYYDMDTFKR IEAFAKDKAT PFVVIDTSII AKQYDDMVNS FPYANVYYAV
KANPAAEILS LLKDKGSNFD IASIYELDMV MNVGVTADRV SYGNTIKKRQ DVRAFYERGV
RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLAQEL
GLEPYGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN ITLKMINMGG GFPANYIDKT
NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGIL VSEVVLISKK SYTALERWVF
TDVGKFSGLI ETMDEAIKFP IYTEKKGELD KCVIAGPTCD SADIMYEHYS YGLPNDLAIG
DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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