Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0528 |
Symbol | hslU |
ID | 5078054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 574711 |
End bp | 576039 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640497655 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001182059 |
Protein GI | 146291635 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAAA TGACCCCCCG TGAGATTGTC CACGAGCTGG ATGCACACAT TATCGGCCAG AAAAAAGCCA AACGCTCCGT TGCCGTAGCC CTGCGTAACC GCTGGCGCCG CATGCAACTA GATGTCGACT TCCGTCAAGA AGTCACCCCC AAGAATATTC TGATGATTGG CCCAACAGGT GTGGGTAAAA CCGAAATAGC CCGCCGTTTA GCCAAACTCG CGAATGCGCC TTTTATTAAG GTCGAAGCCA CTAAGTTCAC CGAAGTGGGT TATGTCGGTA AAGAAGTCGA GCAAATCATC CGTGATTTGA CCGATATCGC CATCAAACTG ACCCGTGAAC AACAAATGGG CAAGTGCCGT CAGCTCGCTG AAGAACATGC CGAAGAGCGC ATTCTCGACG CCCTGCTGCC TAAGCCGAAA AATGACTGGG AAAGCACAGA CACCGACACG GGTTCCAACA CCCGCCAAAT CTTCCGCAAG AAACTACGCG AAGGTCAATT GGATGATAAG GAAATCGATA TCGATGTGGC ACAGCCGCAG ATTGGTATTG AAATCATGTC GCCACCGGGC ATGGAAGAAA TGACAAACCA ACTGCAAAGC CTGTTTAAAA ACATGGGCCA AGCACCGGCA AAACGTCGCA AGATGAAGAT CAAAGAAGCC TTTAAGCTAT TGATCGAGGA AGAAGCCGCT AAGTTGGTGA ATCAAGAGGA TTTAAAAGAG CAAGCCATTG AAATGGTTGA GCAACACGGC ATAGTGTTCC TCGATGAAAT CGATAAAATC TGTAAGCGCG GCGAAACCTC AGGGCCCGAT GTTTCACGCG AAGGTGTGCA ACGTGACCTG CTGCCGCTGG TTGAAGGCTG CACTGTGACC ACTAAACACG GCATGGTAAA AACAGACCAT ATTCTGTTTA TCGCCTCTGG CGCGTTCCAG ATGGCAAAAC CCTCGGATTT AATCCCTGAG TTACAGGGAC GTCTGCCGAT CCGCGTTGAG TTAGATGCGC TATCGGCCGA TGATTTTAAA CGCATTTTGA CCGAGCCACA CGCCTCGCTC ACCGAGCAAT ATGTGGCACT CATGGGGACA GAAGGCGTTA AGGTCGAGTT TACCGAATCG GGCATTGAAA GCATTGCCAA AGCCGCATGG CAAGTAAACG AGCGCACCGA AAATATCGGC GCCCGTCGTC TGCATACTGT GATGGAAAAG CTAATGGAAG ATATTTCTTA TGAGGCTTCC GACAAGTCTG GCAGCGCCTT TGTGATTGAT GCCGATTATG TGAGTGCCCA CTTAGATAAT CTGGTGCAGG ACGAAGACTT AAGCCGCTTT ATTCTCTAG
|
Protein sequence | MSEMTPREIV HELDAHIIGQ KKAKRSVAVA LRNRWRRMQL DVDFRQEVTP KNILMIGPTG VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVEQII RDLTDIAIKL TREQQMGKCR QLAEEHAEER ILDALLPKPK NDWESTDTDT GSNTRQIFRK KLREGQLDDK EIDIDVAQPQ IGIEIMSPPG MEEMTNQLQS LFKNMGQAPA KRRKMKIKEA FKLLIEEEAA KLVNQEDLKE QAIEMVEQHG IVFLDEIDKI CKRGETSGPD VSREGVQRDL LPLVEGCTVT TKHGMVKTDH ILFIASGAFQ MAKPSDLIPE LQGRLPIRVE LDALSADDFK RILTEPHASL TEQYVALMGT EGVKVEFTES GIESIAKAAW QVNERTENIG ARRLHTVMEK LMEDISYEAS DKSGSAFVID ADYVSAHLDN LVQDEDLSRF IL
|
| |