Gene Sputcn32_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0528 
SymbolhslU 
ID5078054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp574711 
End bp576039 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content50% 
IMG OID640497655 
ProductATP-dependent protease ATP-binding subunit HslU 
Protein accessionYP_001182059 
Protein GI146291635 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 
TIGRFAM ID[TIGR00390] ATP-dependent protease HslVU, ATPase subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA TGACCCCCCG TGAGATTGTC CACGAGCTGG ATGCACACAT TATCGGCCAG 
AAAAAAGCCA AACGCTCCGT TGCCGTAGCC CTGCGTAACC GCTGGCGCCG CATGCAACTA
GATGTCGACT TCCGTCAAGA AGTCACCCCC AAGAATATTC TGATGATTGG CCCAACAGGT
GTGGGTAAAA CCGAAATAGC CCGCCGTTTA GCCAAACTCG CGAATGCGCC TTTTATTAAG
GTCGAAGCCA CTAAGTTCAC CGAAGTGGGT TATGTCGGTA AAGAAGTCGA GCAAATCATC
CGTGATTTGA CCGATATCGC CATCAAACTG ACCCGTGAAC AACAAATGGG CAAGTGCCGT
CAGCTCGCTG AAGAACATGC CGAAGAGCGC ATTCTCGACG CCCTGCTGCC TAAGCCGAAA
AATGACTGGG AAAGCACAGA CACCGACACG GGTTCCAACA CCCGCCAAAT CTTCCGCAAG
AAACTACGCG AAGGTCAATT GGATGATAAG GAAATCGATA TCGATGTGGC ACAGCCGCAG
ATTGGTATTG AAATCATGTC GCCACCGGGC ATGGAAGAAA TGACAAACCA ACTGCAAAGC
CTGTTTAAAA ACATGGGCCA AGCACCGGCA AAACGTCGCA AGATGAAGAT CAAAGAAGCC
TTTAAGCTAT TGATCGAGGA AGAAGCCGCT AAGTTGGTGA ATCAAGAGGA TTTAAAAGAG
CAAGCCATTG AAATGGTTGA GCAACACGGC ATAGTGTTCC TCGATGAAAT CGATAAAATC
TGTAAGCGCG GCGAAACCTC AGGGCCCGAT GTTTCACGCG AAGGTGTGCA ACGTGACCTG
CTGCCGCTGG TTGAAGGCTG CACTGTGACC ACTAAACACG GCATGGTAAA AACAGACCAT
ATTCTGTTTA TCGCCTCTGG CGCGTTCCAG ATGGCAAAAC CCTCGGATTT AATCCCTGAG
TTACAGGGAC GTCTGCCGAT CCGCGTTGAG TTAGATGCGC TATCGGCCGA TGATTTTAAA
CGCATTTTGA CCGAGCCACA CGCCTCGCTC ACCGAGCAAT ATGTGGCACT CATGGGGACA
GAAGGCGTTA AGGTCGAGTT TACCGAATCG GGCATTGAAA GCATTGCCAA AGCCGCATGG
CAAGTAAACG AGCGCACCGA AAATATCGGC GCCCGTCGTC TGCATACTGT GATGGAAAAG
CTAATGGAAG ATATTTCTTA TGAGGCTTCC GACAAGTCTG GCAGCGCCTT TGTGATTGAT
GCCGATTATG TGAGTGCCCA CTTAGATAAT CTGGTGCAGG ACGAAGACTT AAGCCGCTTT
ATTCTCTAG
 
Protein sequence
MSEMTPREIV HELDAHIIGQ KKAKRSVAVA LRNRWRRMQL DVDFRQEVTP KNILMIGPTG 
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVEQII RDLTDIAIKL TREQQMGKCR
QLAEEHAEER ILDALLPKPK NDWESTDTDT GSNTRQIFRK KLREGQLDDK EIDIDVAQPQ
IGIEIMSPPG MEEMTNQLQS LFKNMGQAPA KRRKMKIKEA FKLLIEEEAA KLVNQEDLKE
QAIEMVEQHG IVFLDEIDKI CKRGETSGPD VSREGVQRDL LPLVEGCTVT TKHGMVKTDH
ILFIASGAFQ MAKPSDLIPE LQGRLPIRVE LDALSADDFK RILTEPHASL TEQYVALMGT
EGVKVEFTES GIESIAKAAW QVNERTENIG ARRLHTVMEK LMEDISYEAS DKSGSAFVID
ADYVSAHLDN LVQDEDLSRF IL