Gene Sputcn32_0498 details

Gene Information

• Locus tag: Sputcn32_0498
• ID: 5078446
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 544314
• End bp: 546188
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640497625
• Product: diguanylate cyclase
• Protein accession: YP_001182029
• Protein GI: 146291605
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAG TAAGTCGCTT TCTTTTATTC TTTCTTGGGC TGCTAACGTC TGTAACTTCC 
GCTGCGGCTT TACTCCACAT CGACACAGAT ACACCAACAC CACTGAACTT AACTCCTTGG 
CTACAGGTAA GTCATCCTTC AACAACGCAA TTGGCAGATA TCCAGAATCT GTCTAAACAA 
GAATGGCGTA ACTTTACCAA TAAAGATATT CAAAAACTTA GTCAACATAA CTTTTGGCTA 
AACATCAGTT TGAATAGTAC TGATGAAAGT CTTTCACGGA TCTTAGCCCT AGATAATCCT 
TTGTTAGATA AAGTGACTAT CTACCACCTC ATTAATCAAA AACCATTCAA CGTAGTTTAT 
ATGGGAGATA GTCTGCCTTA CTCTGAACGG CCGTTACTCA GTAATATTTT CCTCTACCCT 
TTCAAAATCA GTGCTAATGA AGAACACACT TTTTATCTGC ATATTGAAAC GGAAGGCAGC 
GCAGCAGTCC CACTCTACCT CTGGTCTGCA AATGATTTGG CACAAATAGC AGAATCAACA 
GCCGTTGAGC ATGGATTTCA ATTAGGGGTG TTAGCTGCTA TAGGCATTTT TAGTCTTTTT 
ATTGCTGTCG CTTCAGGATC TTTCAGCTAT AGCTACTATT CTGGTTATGT GCTTAGCATG 
ACTTTACTCG TCGCAACGAT TAACGGCTTC GCTTTCCGTT TTATTTGGCC AGAATGGCCT 
ATGTTGCAAC AAATTATGGT GCCTATACTA CTACCTGTAG TCATGGCATT CGCGTTGATG 
TTTACCGAAA AGATTCTGCA ACTCAAATAC TATAATCGCC ATATGCTGCT TATTTGCCGC 
TACAGCGCTG TATACATTTT ACTCGTTGGG CTATTACTGC CATTTATCCA CTATGGCACA 
GCCTTATACA TTGAGATTAT TTCAGTCGCC ATTCTCAGCC TCATCCTTAT GGTGCTCGCT 
ATTATGCAAG CTATCAATGG GCATAAACTT GCCAGACTTT ACACTATAGG TTGGGTCAGC 
ATGCTAACAG GGGCCTGTAT CAGTAGCCTG CTATACCTGA GCGTGATTGA TTTAAATATG 
AAACCTCAGA CACCAGTTAT GCTCGGACTC ACCTTTGAGA TCATCTTCAT GTCCCTCGTA 
CTTGCAATCC GATATAACGA TGAACGTAAG GCAAAACTGC GTATTCAGCA AGAGGCATTA 
AAGCAAGCCC AGAAAATTCG TAGTGCTCGA GAAGAAGCCC TGAAACTAGA AGCTGAAACG 
AATGAAAAGC TGGAGCAAAT GGTGCAAGAG CGCACCTTAG AGCTTGAGAT TACACTAAGA 
GAATTACACG AAGTAAATCA AAAACTCACA GAACAAAGTA CTATCGATAG TCTCACTGGT 
GTTAAAAACC GCAGCGCTTT TGATAAACGA TTGCTTGCAG AAAGCCGGAT CAGTCGCCGG 
CAAGAAACTC CTATTGCAGT ATTAATGCTT GATATAGATA AGTTTAAATC AATCAACGAT 
CAGTTTGGCC ATTTAGCAGG CGACCAAGCA TTAAAGATTA TCGCTCAAAC ATTACAACAA 
AACTTAAAGC GTCCAACGGA TCTAGTATCA CGTTTTGGTG GTGAAGAGTT TGCTATCATC 
CTCCCCAATA CAACTGCAGA CGGTGCACTT CAAGTTGCTG AAACTATAAG AGATGCAGTA 
ACGTCAATTG GTTTAATGTG GGAAGGAAAA CCCATACCTC TCACCGTCAG TATAGGTGTG 
AGCGCAGATA TAGTCGCTAG CGACCAACAC AGTACAACCT TACTTGAACA AGCAGACAAA 
GCGCTCTATC AAGCAAAAAA TAGTGGGCGT AATCAAGTGA AATTATATTC TTCTGCAACA 
GCAGAACCTA ATTAG 

 

Protein sequence

MAKVSRFLLF FLGLLTSVTS AAALLHIDTD TPTPLNLTPW LQVSHPSTTQ LADIQNLSKQ 
EWRNFTNKDI QKLSQHNFWL NISLNSTDES LSRILALDNP LLDKVTIYHL INQKPFNVVY 
MGDSLPYSER PLLSNIFLYP FKISANEEHT FYLHIETEGS AAVPLYLWSA NDLAQIAEST 
AVEHGFQLGV LAAIGIFSLF IAVASGSFSY SYYSGYVLSM TLLVATINGF AFRFIWPEWP 
MLQQIMVPIL LPVVMAFALM FTEKILQLKY YNRHMLLICR YSAVYILLVG LLLPFIHYGT 
ALYIEIISVA ILSLILMVLA IMQAINGHKL ARLYTIGWVS MLTGACISSL LYLSVIDLNM 
KPQTPVMLGL TFEIIFMSLV LAIRYNDERK AKLRIQQEAL KQAQKIRSAR EEALKLEAET 
NEKLEQMVQE RTLELEITLR ELHEVNQKLT EQSTIDSLTG VKNRSAFDKR LLAESRISRR 
QETPIAVLML DIDKFKSIND QFGHLAGDQA LKIIAQTLQQ NLKRPTDLVS RFGGEEFAII 
LPNTTADGAL QVAETIRDAV TSIGLMWEGK PIPLTVSIGV SADIVASDQH STTLLEQADK 
ALYQAKNSGR NQVKLYSSAT AEPN