Gene Sputcn32_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0475 
Symbol 
ID5080730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp511001 
End bp512356 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content48% 
IMG OID640497595 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_001182006 
Protein GI146291582 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATGA AAAAACGTCT TCTGACTTTG GCTGTCACTG CAGCCTTGTT AAGTTCAACG 
ACTCAACTCC ATGCCGCTGG TTTCCAATTG GCCGAATATT CTTCTACAGG TTTAGGCCGC
GCCTTTGCAG GGGAAGCTGC TATGGCGGAT AACGCCTCTG CCCAAGGTCG AAATCCTGCC
ATGCTCACTT ATTTAGAAGG ACGTCAGCTT TCTGCGGGTG GTATTTATGT GATGCCAAAC
GTCGATGTGA AAGGTGATGT GAGCCTAAGC TCGCCGTTAC TGGGGCCAGA TCCCGTTAAA
ATGCAAGGCG GTGATGCTCT GGATGTGGCC GATAGCGCGT TGGTGCCAAA CTTTTATTAT
TCAAATCAGT TAAATGATCA ATGGACTTGG GGCCTAGCGG TAAACTCTAA CTATGGCCTC
GCCACAGAAT TACCTGCAAC CCACGCCGCG GCCATTTTTG GTAATAAGAC CTCGGTAACG
ACCGTTGAGT TTAATCCTAA TGTTGCTTAT CGCATCAATG ATGCAGTCAG TGTAGGCGGT
GGTGTGCGAA TCGTTTATGG TGAAGGTGAA ATTGGTGCTT CATTACCCGG TTGGGTCGAT
GGTATTAAAC CGAGTTTACC TGCGCAAGTG GCTGCCATGT TGCCCCCAGG CGGTACTGAG
CTGAAGAGTA TGAAGGGTGA TGATATTGGC TATGGCTGGC AGTTAGGCGC AAGCTGGCAG
ATTACCCCCG CTCACCGTTT AGGTTTGGCT TACCATAGCG GCGTTAAGCT AGATCTTGAT
GGTCATGCTT CAGGTGTGAT TTATACGGGT GGCCAAGATG TGTCTATCGA AGGTTATTTA
CCGCTTGAAT TACCCGCATT TGCAGAAATT GCATCCCACC ATCAACTGAC CGATAACTGG
GCCATGCATG CGAGTGTGAA CTGGACCGAT TGGAGTGTAT TTGATCAGTT AGTGGCGTAT
TTCCCCGGCG AGGTTAAACC TAAGGGTGAC TTAGAGTCTG ATTTAGTGAA AGAAGAACAC
TTTGAAGATA ACTGGCGTTT CGCGCTGGGA ACGACCTACC AAGTGAATAA TGCTTGGTTA
GTGCGTGCCG GTGTCGCTTT AGATAAAACG GCGGCAACAG ATGAGTGGCG TACCACTACA
ATTCCTGACT CTGACCGTTT GTGGTTCTCT GTGGGCGCAG GTTATCAGGC TTCCAAAAAT
CTGAATGTTG ATTTTGCAGT GACGTATATC AAAGCGACAG GCGATGCGCC CATCAACGAA
CAGCAAAATC TATTAAACTT AGCGACAGTT AACTTTAACG GCGAAGCGAG CGGCAATGTA
TGGCTTGCGG GTATTCAAAT GAGCTACAAG ATGTAA
 
Protein sequence
MIMKKRLLTL AVTAALLSST TQLHAAGFQL AEYSSTGLGR AFAGEAAMAD NASAQGRNPA 
MLTYLEGRQL SAGGIYVMPN VDVKGDVSLS SPLLGPDPVK MQGGDALDVA DSALVPNFYY
SNQLNDQWTW GLAVNSNYGL ATELPATHAA AIFGNKTSVT TVEFNPNVAY RINDAVSVGG
GVRIVYGEGE IGASLPGWVD GIKPSLPAQV AAMLPPGGTE LKSMKGDDIG YGWQLGASWQ
ITPAHRLGLA YHSGVKLDLD GHASGVIYTG GQDVSIEGYL PLELPAFAEI ASHHQLTDNW
AMHASVNWTD WSVFDQLVAY FPGEVKPKGD LESDLVKEEH FEDNWRFALG TTYQVNNAWL
VRAGVALDKT AATDEWRTTT IPDSDRLWFS VGAGYQASKN LNVDFAVTYI KATGDAPINE
QQNLLNLATV NFNGEASGNV WLAGIQMSYK M