Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0475 |
Symbol | |
ID | 5080730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 511001 |
End bp | 512356 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640497595 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_001182006 |
Protein GI | 146291582 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAATGA AAAAACGTCT TCTGACTTTG GCTGTCACTG CAGCCTTGTT AAGTTCAACG ACTCAACTCC ATGCCGCTGG TTTCCAATTG GCCGAATATT CTTCTACAGG TTTAGGCCGC GCCTTTGCAG GGGAAGCTGC TATGGCGGAT AACGCCTCTG CCCAAGGTCG AAATCCTGCC ATGCTCACTT ATTTAGAAGG ACGTCAGCTT TCTGCGGGTG GTATTTATGT GATGCCAAAC GTCGATGTGA AAGGTGATGT GAGCCTAAGC TCGCCGTTAC TGGGGCCAGA TCCCGTTAAA ATGCAAGGCG GTGATGCTCT GGATGTGGCC GATAGCGCGT TGGTGCCAAA CTTTTATTAT TCAAATCAGT TAAATGATCA ATGGACTTGG GGCCTAGCGG TAAACTCTAA CTATGGCCTC GCCACAGAAT TACCTGCAAC CCACGCCGCG GCCATTTTTG GTAATAAGAC CTCGGTAACG ACCGTTGAGT TTAATCCTAA TGTTGCTTAT CGCATCAATG ATGCAGTCAG TGTAGGCGGT GGTGTGCGAA TCGTTTATGG TGAAGGTGAA ATTGGTGCTT CATTACCCGG TTGGGTCGAT GGTATTAAAC CGAGTTTACC TGCGCAAGTG GCTGCCATGT TGCCCCCAGG CGGTACTGAG CTGAAGAGTA TGAAGGGTGA TGATATTGGC TATGGCTGGC AGTTAGGCGC AAGCTGGCAG ATTACCCCCG CTCACCGTTT AGGTTTGGCT TACCATAGCG GCGTTAAGCT AGATCTTGAT GGTCATGCTT CAGGTGTGAT TTATACGGGT GGCCAAGATG TGTCTATCGA AGGTTATTTA CCGCTTGAAT TACCCGCATT TGCAGAAATT GCATCCCACC ATCAACTGAC CGATAACTGG GCCATGCATG CGAGTGTGAA CTGGACCGAT TGGAGTGTAT TTGATCAGTT AGTGGCGTAT TTCCCCGGCG AGGTTAAACC TAAGGGTGAC TTAGAGTCTG ATTTAGTGAA AGAAGAACAC TTTGAAGATA ACTGGCGTTT CGCGCTGGGA ACGACCTACC AAGTGAATAA TGCTTGGTTA GTGCGTGCCG GTGTCGCTTT AGATAAAACG GCGGCAACAG ATGAGTGGCG TACCACTACA ATTCCTGACT CTGACCGTTT GTGGTTCTCT GTGGGCGCAG GTTATCAGGC TTCCAAAAAT CTGAATGTTG ATTTTGCAGT GACGTATATC AAAGCGACAG GCGATGCGCC CATCAACGAA CAGCAAAATC TATTAAACTT AGCGACAGTT AACTTTAACG GCGAAGCGAG CGGCAATGTA TGGCTTGCGG GTATTCAAAT GAGCTACAAG ATGTAA
|
Protein sequence | MIMKKRLLTL AVTAALLSST TQLHAAGFQL AEYSSTGLGR AFAGEAAMAD NASAQGRNPA MLTYLEGRQL SAGGIYVMPN VDVKGDVSLS SPLLGPDPVK MQGGDALDVA DSALVPNFYY SNQLNDQWTW GLAVNSNYGL ATELPATHAA AIFGNKTSVT TVEFNPNVAY RINDAVSVGG GVRIVYGEGE IGASLPGWVD GIKPSLPAQV AAMLPPGGTE LKSMKGDDIG YGWQLGASWQ ITPAHRLGLA YHSGVKLDLD GHASGVIYTG GQDVSIEGYL PLELPAFAEI ASHHQLTDNW AMHASVNWTD WSVFDQLVAY FPGEVKPKGD LESDLVKEEH FEDNWRFALG TTYQVNNAWL VRAGVALDKT AATDEWRTTT IPDSDRLWFS VGAGYQASKN LNVDFAVTYI KATGDAPINE QQNLLNLATV NFNGEASGNV WLAGIQMSYK M
|
| |