| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0473 |
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| Symbol | |
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| ID | 5080728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 508424 |
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| End bp | 509848 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640497593 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001182004 |
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| Protein GI | 146291580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTG TGCCAAAAAA CGCGGTGGCA AAAACGCTGT ATCAAAAAGT ATGGGATGCC
CACGTTGTAG CGACTCCTGA AGGTGAAGCG CCGATCATTT ATGTCGACAG ACATTTAGTC
CATGAAGTGA CTTCTCCCCA AGCATTCAGT GGCTTAAAAG TGGCGGGCCG CAAACTGCGT
GCACCGGAAA AAACCTTTGC TACTATGGAT CACAATACTT CGACCCGTAG CGCCAGCTTG
GATGCCCTAA GCCCAATGGC GCGCACACAG GTTGAAACCT TAGCGCAAAA CTGTAAAGAC
TTTGGCGTGC GTTTATACGA CATTCATCAT CCTAATCAAG GGATTGTGCA TGTGATGGGC
CCTGAGTTGG GTATTACCTT TCCGGGCACT GTGATTGTCT GTGGTGATTC CCATACCGCG
ACCCATGGCG CCTTTGGCGC ATTGGCGTTT GGCATTGGCA CATCGGAAGT TGAGCATGTT
TTAGCAACCC AAACCCTGCG TCAGTTAAAA GCTAAGACCA TGAAGATTGA AGTGCGTGGT
CATGTTAGCG ATGGCGTGAC CGCCAAAGAT ATCGTACTCG CTATTATTGG CAAAATCGGT
ATGGATGGCG GCACGGGTTA TGTGGTGGAG TTCTGTGGTG AGGCGATTGA AGCCCTGTCG
ATGGAAGGCC GAATGACAGT GTGCAACATG GCGATCGAGA TGGGCGCTAA GGCGGGCATG
GTCGCGCCGG ATCAAACAAC TTTCGACTAT TTAGCAGGCC GTGAGTTTGC ACCCAAGGGC
GAAGATTGGG CAGAGGCTGT CGCTTACTGG CAAGCCATAA AAACCGATGA TGGCGCCGTA
TTTGATGCTG TCGTTGAATT AGATGCCGCT GATATCGCAC CGCAATTGAC TTGGGGCACT
AACCCCGGCC AAGTCGTAGC GATCGATGGT AAAGTGCCTA ATCCTCTTGA TGAAGCCAAC
CCAAGCACCC GTGCCAGTAT GGAGAAGGCT TTAGAATACA TTGGCCTGAG TGCGGGCACG
CCGATGACAG ACATCAGTAT CAACAAGGTA TTTATCGGCT CTTGCACTAA CTCACGGATT
GAAGATTTAC GCAGCGCCGC CGTACATGCT AAAGGCCGCA AAGTCGCGAG TGGCGTCACC
GCGATTGTCG TACCTGGTTC TGGTCAAGTG AAAGCCCAAG CCGAAGCCGA AGGCTTAGAT
AAAATCTTTA TCGAAGCGGG ATTTGAGTGG CGTTTACCGG GTTGCTCTAT GTGTTTAGCG
ATGAACGATG ACAGATTAGA AGCGGGTGAT CGCTGCGCTT CGACCAGTAA TCGTAATTTC
GAAGGTCGCC AAGGCCGCGG CAGTCGCACC CATTTAGTGA GCCCTGCAAT GGCCGCCGCC
GCTGCGGTGG CTGGGCATTT TGTCGATATT CGTAAACCTT ACTAA
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| Protein sequence | MTTVPKNAVA KTLYQKVWDA HVVATPEGEA PIIYVDRHLV HEVTSPQAFS GLKVAGRKLR
APEKTFATMD HNTSTRSASL DALSPMARTQ VETLAQNCKD FGVRLYDIHH PNQGIVHVMG
PELGITFPGT VIVCGDSHTA THGAFGALAF GIGTSEVEHV LATQTLRQLK AKTMKIEVRG
HVSDGVTAKD IVLAIIGKIG MDGGTGYVVE FCGEAIEALS MEGRMTVCNM AIEMGAKAGM
VAPDQTTFDY LAGREFAPKG EDWAEAVAYW QAIKTDDGAV FDAVVELDAA DIAPQLTWGT
NPGQVVAIDG KVPNPLDEAN PSTRASMEKA LEYIGLSAGT PMTDISINKV FIGSCTNSRI
EDLRSAAVHA KGRKVASGVT AIVVPGSGQV KAQAEAEGLD KIFIEAGFEW RLPGCSMCLA
MNDDRLEAGD RCASTSNRNF EGRQGRGSRT HLVSPAMAAA AAVAGHFVDI RKPY
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