Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0472 |
Symbol | |
ID | 5080727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 507330 |
End bp | 508424 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640497592 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_001182003 |
Protein GI | 146291579 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTATC AAATAGCAGT ATTAGCAGGG GATGGGATCG GTCCTGAAGT GATGGCAGAG GCGCGTAAAG TGCTGCGTGA AGTGGAAGCG CGATTCGATT TTAATATCGA ATACACTGAA TATGATGTTG GCGGTATTGC CATTGATAAC CACGGTTGTC CCTTACCCGA TGCCACGCTA AAGGGCTGTG AAGCGGCCGA TGCGATCCTA TTTGGCTCGG TAGGCGGCCC TAAGTGGGAA AAGTTACCGC CAAATGAGCA ACCTGAGCGC GGTGCACTAC TGCCCTTGCG TGGTCACTTC GAACTGTTTT GTAATCTGCG CCCAGCTAAA TTGCATGATG GCTTAGAACA TATGTCACCG CTGCGTAGCG ATATCTCTGC CCGTGGATTT GATGTCTTAT GTGTACGCGA GTTAACTGGC GGCATTTATT TTGGTAAGCC AAAGGGTCGT CAAGGTGAAG GCGAAAATGA AGAAGCCTTC GATACCATGC GTTATAGCCG TCGCGAAATT AGCCGTATCG CCCGCATAGC CTTTGAAGCC GCCCGTGGTC GCCGTAAAAA AGTGACCTCA GTGGATAAAG CCAACGTGCT CGCCTGTTCA GTGTTATGGC GCCAAGTGGT TGAAGAAGTC GCGGTAGATT TCCCCGATGT CGAGCTTGAA CACATCTATA TCGATAATGC GACCATGCAG TTGCTACGTC GTCCCGATGA GTTCGATGTG ATGCTATGTT CTAACCTGTT CGGCGATATT TTATCCGACG AAATCGCCAT GTTAACGGGC TCTATGGGCT TGTTGTCATC GGCGAGCATG AACAGCACTG GCTTTGGTTT ATTCGAACCT GCGGGTGGCA GTGCGCCGGA TATCGCAGGT AAAGGCATTG CAAACCCTAT CGCCCAAATT CTGTCGGCGG CATTAATGCT GCGCCACAGC TTAAAGCAAG AAGAAGCCGC CTGTGCGATT GAACGCGCCG TAAGCAAAGC ATTAAATTCT GGCTACTTAA CTGGTGAGCT ATTGAGCAGC GACAAGCGTA GCCAAGCTAA ATCAACCGCC GAGATGGGTG ACTTTATCGC CAATGCTATA AAGGAAGGTG TGTAA
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Protein sequence | MSYQIAVLAG DGIGPEVMAE ARKVLREVEA RFDFNIEYTE YDVGGIAIDN HGCPLPDATL KGCEAADAIL FGSVGGPKWE KLPPNEQPER GALLPLRGHF ELFCNLRPAK LHDGLEHMSP LRSDISARGF DVLCVRELTG GIYFGKPKGR QGEGENEEAF DTMRYSRREI SRIARIAFEA ARGRRKKVTS VDKANVLACS VLWRQVVEEV AVDFPDVELE HIYIDNATMQ LLRRPDEFDV MLCSNLFGDI LSDEIAMLTG SMGLLSSASM NSTGFGLFEP AGGSAPDIAG KGIANPIAQI LSAALMLRHS LKQEEAACAI ERAVSKALNS GYLTGELLSS DKRSQAKSTA EMGDFIANAI KEGV
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