| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0467 |
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| Symbol | |
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| ID | 5080722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 499762 |
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| End bp | 500646 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497587 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001181998 |
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| Protein GI | 146291574 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.323574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGATC GTGAATACCG CAAAGGGATC CTACTTGCCG TCAGTGCTTA CTGTATGTGG
GGTTTTGCGC CTTTATATTT CAAATTACTC AACCATGTTT CCGCCACCGA AATTTTGCTT
CATCGGGTGA TTTGGTCATT CGTATTTATG CTGATCATTA TGCAATTTAT CGGCGGTTTT
TCTCGTTTAC GCTTACTGTT TAAACAGCCT AAGCAGCTTA TCGTCCTCGT CATTACCTCC
ATCCTGATCG CGGGAAACTG GCTACTATTT ATCTGGGCGG TAAATAACGA CCACATGCTC
GATGCCAGCC TAGGCTACTT CATCAACCCT CTACTTAACG TCTTGCTCGG TATGCTATTT
CTAGGTGAGA GGCTGCGTAA ATTACAATGG TTCGCGGTCG CACTCGCCAG TGCTGGCGTA
TTGATCCAGT TAATCTCTTT TGGCTCAATT CCCATCGTCT CACTGGCACT CGCTGGCACT
TTTGGCTTTT ATGCACTGCT GCGAAAAAAG GTCAATGTAG ATGCCAAAGC AGGCTTATTA
GTCGAAACCG CAGTGCTATT ACCGGTTGCA CTGGTTTATC TCGTCGCAAC CTTAGACACG
GCCACGGCGA GCATGCTGAC TAACGATTGG CAATTGAATC TGATGTTAAT GGCTGCTGGG
ATAGTCACCA CGATTCCTTT GCTCTGTTTT GCAGGGGCAG CGGTACGTAT TCCATTGTCT
ATGCTCGGCT TTTTCCAATA TATTGGCCCG AGTATTATGT TTATCCTCGC GGTGAGTCTG
TTCAATGAGC CCTTCGATGC CGAAAAAGGC GTGACCTTCG GTTTTATCTG GAGCGCGCTG
TTAGTCTTCA CCTTAGATAT GGCCTATAAA CGCAAACCAG CGTAA
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| Protein sequence | MPDREYRKGI LLAVSAYCMW GFAPLYFKLL NHVSATEILL HRVIWSFVFM LIIMQFIGGF
SRLRLLFKQP KQLIVLVITS ILIAGNWLLF IWAVNNDHML DASLGYFINP LLNVLLGMLF
LGERLRKLQW FAVALASAGV LIQLISFGSI PIVSLALAGT FGFYALLRKK VNVDAKAGLL
VETAVLLPVA LVYLVATLDT ATASMLTNDW QLNLMLMAAG IVTTIPLLCF AGAAVRIPLS
MLGFFQYIGP SIMFILAVSL FNEPFDAEKG VTFGFIWSAL LVFTLDMAYK RKPA
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