| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0462 |
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| Symbol | radC |
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| ID | 5080717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 496223 |
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| End bp | 496900 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497582 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001181993 |
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| Protein GI | 146291569 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000108191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCATCA AAGATTGGCC AGAGGGAGAG GGGCCTAGAG ATAAACTACT ACAAAAAGGA
GCTGCCTATT TATCGGATGC AGAGTTACTG GCCGTATTGC TGCGTAATGG TTTAGCGGGT
CTTAACGCTG TCGATCTAGC TAGATCGTTG ATCAGTGAGT TTGGAGGATT AAGAAATCTA
CTTTGCGCCC CTAAAAATCA GGTGTGTCGA CTTCCTGGCG TAGGGCCTGT AAAATACGCT
CAGCTTCAAG CTGCAGCTGA ATTAGCGCGG CGTGTCGCAC AAGAAAATCT ACAAAGAGGT
CAGGTTTTGA CAAATCCCGA TTTAACTCGG GACTATTTAA TGAGACAATT AACTGACCGC
TCCTATGAAG TGTTCGCAAT TTTGCTGCTA GATAGCCAGC ATAGAGTGAT TCAGTTTGTC
GAATTATTCC GCGGCACAAT AGACTCAGCC TCAGTGTATC CACGTGAAGT GGTGAGCTTA
GTGCTTGAAA AAAAGGCAGC TGCCGTTATA GTGTGTCACA ATCATCCGTC TGGTATTGCC
GAGCCCAGTC AGGCTGACCG ACGAATAACT GAGCGATTAA AAAATGCGTT AGCAACCATA
GACGTATCCT TGTTGGACCA TATGGTTGTA GGTGATCGAG AGATAGTTTC TTTTGCAGAA
CGAGGCTGGA TTAATTAA
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| Protein sequence | MGIKDWPEGE GPRDKLLQKG AAYLSDAELL AVLLRNGLAG LNAVDLARSL ISEFGGLRNL
LCAPKNQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLTDR
SYEVFAILLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA
EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN
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