Gene Sputcn32_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0462 
SymbolradC 
ID5080717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp496223 
End bp496900 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content46% 
IMG OID640497582 
ProductDNA repair protein RadC 
Protein accessionYP_001181993 
Protein GI146291569 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.08191e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATCA AAGATTGGCC AGAGGGAGAG GGGCCTAGAG ATAAACTACT ACAAAAAGGA 
GCTGCCTATT TATCGGATGC AGAGTTACTG GCCGTATTGC TGCGTAATGG TTTAGCGGGT
CTTAACGCTG TCGATCTAGC TAGATCGTTG ATCAGTGAGT TTGGAGGATT AAGAAATCTA
CTTTGCGCCC CTAAAAATCA GGTGTGTCGA CTTCCTGGCG TAGGGCCTGT AAAATACGCT
CAGCTTCAAG CTGCAGCTGA ATTAGCGCGG CGTGTCGCAC AAGAAAATCT ACAAAGAGGT
CAGGTTTTGA CAAATCCCGA TTTAACTCGG GACTATTTAA TGAGACAATT AACTGACCGC
TCCTATGAAG TGTTCGCAAT TTTGCTGCTA GATAGCCAGC ATAGAGTGAT TCAGTTTGTC
GAATTATTCC GCGGCACAAT AGACTCAGCC TCAGTGTATC CACGTGAAGT GGTGAGCTTA
GTGCTTGAAA AAAAGGCAGC TGCCGTTATA GTGTGTCACA ATCATCCGTC TGGTATTGCC
GAGCCCAGTC AGGCTGACCG ACGAATAACT GAGCGATTAA AAAATGCGTT AGCAACCATA
GACGTATCCT TGTTGGACCA TATGGTTGTA GGTGATCGAG AGATAGTTTC TTTTGCAGAA
CGAGGCTGGA TTAATTAA
 
Protein sequence
MGIKDWPEGE GPRDKLLQKG AAYLSDAELL AVLLRNGLAG LNAVDLARSL ISEFGGLRNL 
LCAPKNQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLTDR
SYEVFAILLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA
EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN