| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0456 |
|---|
| Symbol | rph |
|---|
| ID | 5080711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 491350 |
|---|
| End bp | 492063 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640497576 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_001181987 |
|---|
| Protein GI | 146291563 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAA GTAACAGAAC GCCAGCACAA ACTCGTCCCA TCACTATCAC TCGCCAGTTT
ACGGCCCATG CCGAAGGTTC TGTGTTAGTG GAATTTGGCG AAACGAAAGT GCTTTGTACC
GCCAGTTTTA CTGAAGGTGT GCCACGTTTC CTTAAAGGTC AGGGTCAAGG CTGGGTGACG
GCAGAGTACG GCATGTTGCC ACGTTCGACC CATAGCCGTA TGGATCGTGA AGCAGCTCGC
GGTAAGCAAT CTGGTCGTAC ACAAGAAATT CAACGTCTTA TCGGTCGTGC GCTGCGCGCC
TGTGTGGATA TGAAAGCCCT AGGCGAAAAC ACTATCGTTA TCGATTGTGA TGTGATCCAA
GCTGATGGTG GCACGCGTAC TGCGTCAATC ACTGGCGCCT GTGTGGCCTT AGTGGATGCA
TTGAACTGGG CACGAGGTAA AGGGATCATT AAATCTAACC CTTTGAAATT CCTTATCGCT
GCCGTTAGCG TAGGTATTTA CAAGGGTGAA GCGATAAGCG ATCTCGAATA TATCGAAGAC
AGCGCCGCTG AAACTGATAT GAATGTGGTG ATGACAGAAA CGGGTAAAAT TATTGAAATC
CAAGGTACAG CTGAAGGTGA GCCGTTTACT CACGAAGAGT TGATTGAGCT ACTCGGATTG
GCGAAGAACA GTATCCGTGA AATCGTCGAT GTGCAAAAAG CCGCTTTAAA CTAA
|
|---|
| Protein sequence | MRPSNRTPAQ TRPITITRQF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGQGQGWVT
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRALRA CVDMKALGEN TIVIDCDVIQ
ADGGTRTASI TGACVALVDA LNWARGKGII KSNPLKFLIA AVSVGIYKGE AISDLEYIED
SAAETDMNVV MTETGKIIEI QGTAEGEPFT HEELIELLGL AKNSIREIVD VQKAALN
|
|---|
| |