| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0366 |
|---|
| Symbol | |
|---|
| ID | 5081300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 399127 |
|---|
| End bp | 400476 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640497486 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001181897 |
|---|
| Protein GI | 146291473 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00215301 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTAATC GTTTATTTAT CAAATTATTG CTCGGATTCT GGCTCTGTAG CTCACTGATC
ATTGCTTTGG TCGGCCTGTT GCCATTACTA CAACAAAAGC ACGATAGAGC ACCGATTCCA
CCTCATCTTG AAAATGCGTT ATCCAATATT GCGATACGAT TCCAAGAAAA TCCTTCCCTG
TTCGAGTCTG ACTTTTTACG TCGATGGGAA AGACAAAGAA ATATGGAAGG AAAACCGCTC
CGTATTTATC TCGCGAACAG CGAAGGGCAA GTGATTAATA CCCAAAAAAT TAGCCGTGGT
GTTCGTAGCT TTATGCTGAT GACGGATGAA GATAAACGAC CCATTAGCCA TCAATTTAAA
GATGAATTGG TATTTGGCCC TTACCACTTC AATGTTAATG GTGAAACCTA CTCATTATAC
GGCCGCTTGC CGGATCATCA TCCACGGCCT TGGTTCTTCT TTTTTGTCGA AAACAAACTG
TTAACCTTAA GTCTAGCAAT TCTACTTTCG GGGTTACTCT GTGGTTTACT CGCGTGGCAT
TTAGGTAAAG CGCTAAATTC CCTTAAAAAA AGTGCTAATG CTCTCGCTGA GGGCGATTTA
AGTAACCGTG TTGATAAAGC CACAACTAAG CGTAATGATG AAATAGGCCA ACTCGCCAGT
GCCTTTAATA GCATGGCGGA TTCTATTGAA ACTATGGTTA AAAATCAGCA AAGGTTAATG
GGAGATATCT CCCACGAATT ACGCACCCCA TTGACACGTT TACAATTATC TTTGGCACTT
GCGCGCAAAA AAGGCCAGCA AACCACAGAA ACTGACCGCA TAGGTTATGA GGCCGAACAA
CTTGAAAAAC TTATCGCGGA ATTGCTAGAG CTCTCACGAG TCAAACTCAA CACCAACGAA
ACCAAAGTGC GCTTAGGCCT AGCCGAATCC TTAAGCCAAG TACTAGACGA TGCGGAATTT
GAGGCCGATC AACAGGATAA AAAAATCACT ATCGATATAG ATGAAGATAT TGAATTAGCA
CACTTTCCAA AATCGCTTTC CCGCGCCATC GAAAACCTGC TGCGTAACGC GATTCGTTAT
GCCAAAAACG ATATCTATAT ACACGCCAGC GCCACGGCTG ATGAAGTCTA TATCACCATT
AAAGATGATG GGCCGGGCAT TGATGCCTCT GAGCTTGATG CTATTTTTAA GCCTTTCTAC
CGTCCCGATT CGGCAAGACA GAGAGAAAGT GGTGGTTGGG GTTTAGGACT TGCCATTACC
GAAGCTGCCA TTACTGCCCA TAAGGGTAAG ATTAAGGCAA AGAATAGAGT ACCACATGGG
CTTGAAGTCA ATATTACCCT ACCCGTTTAA
|
|---|
| Protein sequence | MPNRLFIKLL LGFWLCSSLI IALVGLLPLL QQKHDRAPIP PHLENALSNI AIRFQENPSL
FESDFLRRWE RQRNMEGKPL RIYLANSEGQ VINTQKISRG VRSFMLMTDE DKRPISHQFK
DELVFGPYHF NVNGETYSLY GRLPDHHPRP WFFFFVENKL LTLSLAILLS GLLCGLLAWH
LGKALNSLKK SANALAEGDL SNRVDKATTK RNDEIGQLAS AFNSMADSIE TMVKNQQRLM
GDISHELRTP LTRLQLSLAL ARKKGQQTTE TDRIGYEAEQ LEKLIAELLE LSRVKLNTNE
TKVRLGLAES LSQVLDDAEF EADQQDKKIT IDIDEDIELA HFPKSLSRAI ENLLRNAIRY
AKNDIYIHAS ATADEVYITI KDDGPGIDAS ELDAIFKPFY RPDSARQRES GGWGLGLAIT
EAAITAHKGK IKAKNRVPHG LEVNITLPV
|
|---|
| |