| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0348 |
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| Symbol | |
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| ID | 5081282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 381710 |
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| End bp | 383218 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497468 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001181879 |
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| Protein GI | 146291455 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTA TAAAGAAAGT CGATTTTATT GACAGTATCG AAGATGCGCT TCAATACATC
TCTTACTATC ATCCACTGGA TTTTATTCGT GCGATGGAAA AGGCGTACCA CGCCGAGAAA
AGTGTCGCGG CTAAAGATGC TATTGCTCAA ATATTGATTA ATTCGAGAAT GGCTGCAGAA
GGTAAGCGTC CTATTTGCCA AGATACGGGC ATTGTGACTT GTTTTGTCAA AATTGGTATG
CAAGTGCAGT GGGATACCGA TATGACGGTA CAGGAAATGG TTGATGAAGG CACAAAAAGA
GCCTACAACT GCGTAACTAA TCCATTGCGG ATGTCGGTTG TCTCCGATCC CGCTGGCGCG
CGTAAAAATA CGAATACCAA TGGCCCTGCG GTCGTCCATA TCGAAATGGT TCTCGGTGAT
AAGGTTGATA TTATGATCGC GGCCAAGGGC GGCGGTTCAG AAAATAAGAC CAAAATGGCA
ATGCTAAACC CATCGGATGA TATTGCGGCA TGGGTGGAAA AAACCGTACC GCTAATGGGC
GCGGGTTGGT GTCCTCCTGG CATGTTGGGT ATTGGCATCG GTGGTACGGC AGAAAAAGCG
GCATTGATGG CTAAAGAAGC GTTAATGGGC TCTGTTGATA TCCACGAATT ACAGGCGCGG
GGAGCACAGA CTACCGAAGA AGAGCTGCGC TTAGATATTT TTGAACGTGT TAATAAACTC
GGTATTGGCG CGCAAGGTTT AGGTGGGATG ACCACTGTTG TGGATATCAA AATCAAAACC
GCACCGACAC ATGCGGCATC CAAACCTGTC TGTATTATTC CGAATTGTGC GGCAACGCGG
CACGTGCATT TTACGTTAGA TGGCAATGGG CCTGCTAAGT TAACGCCACC TAAGCTTGCC
GATTGGCCAG AGGTAACCTG GGAAGTCGGT AAAAATGTGC GCCGAGTCGA TGTAAATAAA
CTTACAAAAG CCGATATCGC TGAGTGGCGC TCTGGTGAAA CCGTCCTACT CTCAGGTAAA
ATTCTTACCG GTCGTGATGC TGCCCATAAA CGCATTCAAG ACATGCTTGC ACGGGGAGAA
TCCTTCCCTG TTGATTTCCA GAATCGTTTT ATCTACTACG TCGGTCCAGT GGATGCTGTA
GGTGATGAAG TGGTAGGCCC TGCAGGCCCA ACGACCTCGA CCCGCATGGA TAAGTTCACC
GATATGATGC TAGAGCAAGC GGGCTTAATG GGTATGATTG GTAAATCGGA ACGTGGTGCT
GCTACGGTTG AGTCGATTAA GAAAAATCAA GCCGTGTATT TGATGGCTGT CGGTGGCGCC
GCATACTTAG TGGCAAAAGC GATTAAGTCA GCCAAGATCC TCGCCTTTGA AGATCTTGGA
ATGGAAGCCA TTTACGAGTT TGATGTTGAA GATATGCCAG TGACTGTCGC CGTGGACAGC
CTCGGCGGAA ATGTGCACGA AACCGGGCCA CAAACCTGGA AACTCAAAAT TGCCGAAATG
ACTGCCTAA
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| Protein sequence | MTTIKKVDFI DSIEDALQYI SYYHPLDFIR AMEKAYHAEK SVAAKDAIAQ ILINSRMAAE
GKRPICQDTG IVTCFVKIGM QVQWDTDMTV QEMVDEGTKR AYNCVTNPLR MSVVSDPAGA
RKNTNTNGPA VVHIEMVLGD KVDIMIAAKG GGSENKTKMA MLNPSDDIAA WVEKTVPLMG
AGWCPPGMLG IGIGGTAEKA ALMAKEALMG SVDIHELQAR GAQTTEEELR LDIFERVNKL
GIGAQGLGGM TTVVDIKIKT APTHAASKPV CIIPNCAATR HVHFTLDGNG PAKLTPPKLA
DWPEVTWEVG KNVRRVDVNK LTKADIAEWR SGETVLLSGK ILTGRDAAHK RIQDMLARGE
SFPVDFQNRF IYYVGPVDAV GDEVVGPAGP TTSTRMDKFT DMMLEQAGLM GMIGKSERGA
ATVESIKKNQ AVYLMAVGGA AYLVAKAIKS AKILAFEDLG MEAIYEFDVE DMPVTVAVDS
LGGNVHETGP QTWKLKIAEM TA
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