| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0292 |
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| Symbol | |
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| ID | 5081119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 308360 |
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| End bp | 309217 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497409 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001181824 |
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| Protein GI | 146291400 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000107182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC AAACGCAATC AATGGCACTG ACAGTCCCAC AGGGCAGTAG TAGTCTAGAG
GCTTATATCC ATTCAGTGAC TAGCATCAGT ATGCTGGACG CTGAGGCTGA GTATGAGTTA
GCCAAGCGTT TGCAGGAAAC GGGTGATCTG CAAGCAGCGA AGCAACTGAT TATGTCGCAT
TTACGCTTTG TTGTGCATGT TGCAAAAGGC TATTCAGGTT ACGGTCTGCC ACAGGCGGAT
TTGATCCAAG AAGGCAATAT CGGTCTAATG AAAGCAGTAA AACGCTTCGA TCCCGATGTT
GGCGTACGTC TGGTGTCCTT TGCTGTGCAC TGGATCAAAG CAGAAATTCA TGAATATGTG
CTCAAAAACT GGCGCATTGT TAAAGTCGCC ACCACGAAAG CACAACGTAA GTTGTTCTTT
AACATCCGTA AAGCGAAAAA ACGCTTAGGT TGGTTTAGCG ATGAAGAAGT CACTATGGTG
GCTGAAAATT TAGGTGTATC TAAAGCTGAT GTGACCGAAA TGGAATCACG TATGGCAGCC
CAAGATCCCG CGTTTGATTT GACCAGTGAT AATGATGATG AACAGGATTT TGCCCCAGTT
CATTATCTTG AAGATCATTC GTCAGATTTA GCCGAAAACA TCGAAAACGA CAACTGGGAA
TCCAATGCCC AAGGTCGTTT ATTATCGGCC ATCAAAACCT TAGACGAACG TAGCCAGCAT
ATTCTGCGCG CCCGTTGGTT AGATGACGAT AAAACCACCC TGCAAGAATT GGCAGAAACC
TATCAAGTCT CGGCTGAGCG TATTCGCCAG TTAGAGAAAA ACGCCATGAA CAAGCTTAAG
GCCTGTATGG AAGCCTAA
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| Protein sequence | MTFQTQSMAL TVPQGSSSLE AYIHSVTSIS MLDAEAEYEL AKRLQETGDL QAAKQLIMSH
LRFVVHVAKG YSGYGLPQAD LIQEGNIGLM KAVKRFDPDV GVRLVSFAVH WIKAEIHEYV
LKNWRIVKVA TTKAQRKLFF NIRKAKKRLG WFSDEEVTMV AENLGVSKAD VTEMESRMAA
QDPAFDLTSD NDDEQDFAPV HYLEDHSSDL AENIENDNWE SNAQGRLLSA IKTLDERSQH
ILRARWLDDD KTTLQELAET YQVSAERIRQ LEKNAMNKLK ACMEA
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