| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0282 |
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| Symbol | |
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| ID | 5081109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 297048 |
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| End bp | 300197 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497399 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001181814 |
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| Protein GI | 146291390 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAGT ACATTATCGA AGCCTCCATC AGACAACGAC TTATGGTGTT GATCATTGCC
ATCATGATCA CTGTTTGGGG CGTACAAGAG TTGCGTAAAA CGCCACTCGA TGCATTGCCC
GATCTGTCGG ATGTGCAAGT GATTATTAAA ACGTCCTATC CTGGGCAAGC GCCTAAATTG
GTAGAAGAAC AAGTCACTTA TCCTTTATCT ACCGCCATGT TAGCTGTACC CGGTGCCAAG
ACGGTTCGGG GATTCTCGAT GTTTGGTGAC TCCTATGTCT ATGTGATTTT CGAAGATGGC
ACAGATATCT ACTGGGCGCG CTCACGGGTA TTAGAATACT TAAGTCAGAT CAGTAGCCGT
TTACCCCAAG GCGTACAACC GTCCCTTGGC CCCGATGCCT CAGGTGTGGG TTGGGTGTTT
GAATATGCGT TGGTCGATCG CTCCGGCAGT TTAGATTTAT CACAGCTCAA AAGCCTGCAG
GACTGGTATC TTAAATTAGA GCTACAAAGC GTGGCAGGCG TGTCTGAAGT CGCAACCGTC
GGTGGCATGG AGCAGACCTA TCAGATTGTG CTCGAACCCG ACAAAATGGC GATCTATAAA
CTGGATATCG CCAGCATTAA AGATGCGATA GAAAAATCTA ATAGCGAAGC GGGTGGCTCG
GTCATTGAGA TGGCTGAAGC CGAGTATATG GTGCGCGCCA AAGGCTATCG TCAAACCCTT
GAGGATTTCC GCGAAATTCC ATTAGGCATC ACCAGTCCTT CTGGCACGGG TCTATTACTC
AAGGATGTCG CCACCGTGCG CAAAGGCCCG GCCTCACGCC GCGGTATAGC CGAACTCGAT
GGTGAAGGTG AAGTCGTAGG CGGCATTATT GTGATGCGTT ACGGCGAAAA TGCTTTATCC
ACGATTGATG CCGTAAAAGC TAAGCTTGAA GAACTGAAAG CTGGTTTACC CGATGGGGTT
GAAATCATCC CCACCTACGA CAGATCCCAA TTAATCCTTA ATTCCGTTGA TAACCTGTTC
AGCAAAGTTG TCGAAGAGAT GCTGGTCGTA GGGCTGGTCT GCCTGCTGTT TTTACTGCAT
GCACGCTCAA CCTTAGTCGC CATCATTACC CTGCCGCTTT CAATCCTGAT TGCCTTTATC
GTAATGAATA AGATGGGGGT GAATGCCAAC ATTATGAGTC TTGGGGGTAT CGCGATTGCC
ATTGGCGCGG TGGTGGACGG CGCAATTGTG ATGATTGAAA ACCTGCACAA ACATTTGGAG
CAGTTTCACA CTGAACACAA CCGAGAACCC GATACCAAAG AACACTGGCG GATCGTCACC
GAAGCCTCGA TTGAGGTTGG CCCAGCACTA TTTTTCTCTT TAATTATTAT TACCTTAAGT
TTTGTACCTG TGTTTGCACT CGAAGCACAG GAAGGCCGTT TATTTGCACC TCTGGCCTAT
ACCAAATCCT TTGCTATGGC CGCTTCCGCA TTATTAGCAA TCACATTAGT GCCAGTCTTA
ATGGGCTATT TTATTCGGGG AAAAATTCCG AGTGAGCATA AAAATCCCAT CAGTCGCGTG
CTGATCGCTT TATATAAGCC ATCGCTTAAT CTGGTACTTA GGTTCCCTAA AATCACCTTA
GCATTAGCGT TGATTGCCTT AGTCAGCGCT TGGTATCCGA TGACGCGCAT GGGCAGTGAG
TTTATGCCCG AGTTAGAAGA AGGCGATTTA CTCTACATGC CAACCGCGTT ACCAGGACTC
AGTGCGGGCA AAGCCGCCGA AGTGTTACAG CAAACCGATC GTTTGATTAA AACCGTCCCC
GAAGTCGCCC GCGTATTTGG TAAGGTGGGC CGCGCCGAGA CTGCGACCGA TCCCGCGCCG
TTAACTATGC TCGAAACCAC CATCATGCTT AAACCCCATG AAGAATGGCG CGAGGGTATG
ACCTTAGATG GCATCATCGC TCAACTGCAA CAAACGGTGA AAGTGCCGGG TATCACGAAT
GCTTGGGTTC AACCCATCAA AACCCGTATC GATATGCTCT CGACTGGGAT AAAAACCCCC
GTTGGCATTA AGATCACCGG CGCCGATGTG AACGAACTAC AAAGCCTAGG AGCAGAAATA
GAGGCCATTC TCAGTAGAGT GCCACACACT AAGTCGGCCT ATGCCGAACG CAGTGGCGGC
GGGCGTTATA TCGATATCAC CCCAAAACTC GATGTGGCTG CACGTTACGG TATGTCATTG
CAGGATATTC AAGATGTAGT ACGTTACGCC ATTGGCGGTA TGGATATTGG TGAATCGATA
CAAGGGGCTG AGCGTTATCC CATCAACCTA CGTTATCCCC GTGAGCTACG CGATAATATT
GAGAAGCTAC GTGAACTCCC TGTGATCACT AAATCGGGAA ATTACCTGCC ACTGCGAAAT
TTAGCGGATA TCGAAATCAC CGATGGCGCA CCTATGCTCA CCAGTGAAAA CGGTCGCTTA
ATCTCTTGGG TGTTTATCGA TATTGAAGGC ACGTCTATCG GCGAATATAT TACTACTGCC
AAGCAAGCAT TAACTGCCGA ACTTAAAGTG CCCCCGCGCT ACAGCTATAC CTTCGCAGGC
CAGTATGAAT ATATGCAACG GGTAGATGCA AAACTGAAGC AAGTGATCCC TATGGCCTTA
GGTGTGATAT TCATCCTGTT GATGATGACA TTTGGCTCTA CTTTGCAGGC GAGTATTATC
ATGCTCAGCC TCCCATTCGC GCTGGTCGGC AGCACTTGGC TATTGTATCT ACTGGATTAC
AACATCTCAG TCGCCGTCGC AGTCGGTATG ATTGCGTTGG CGGGCGTTGC CGCGGAGTTT
GGGGTAATCA TGCTGATTTA CCTTAATAAT GCGATTAAGC ACAGGCAAGA GAAGAATAAC
TACCATACAG TTACCGATCT CAAAGAAGCT TTAATTGAAG GTGCTGTTAT GCGTATTCGC
CCCAAAGCGA TGACAGTCGC CACTATCTTT TTTGGCCTAC TGCCCATTAT GTGGGGCGCA
GGTTCGGGGA ATGATGTGAT GCAAAAAATC GCCGCACCTA TGGTTGGTGG TATGGTCACA
GCACCAATCC TGTCGCTCTT TGTGCTGCCC GCACTTTATC TATTAATTTA CTCTCGTCAG
TTAAAGAAAG AAGCTGCACC AATAAGTTAA
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| Protein sequence | MLKYIIEASI RQRLMVLIIA IMITVWGVQE LRKTPLDALP DLSDVQVIIK TSYPGQAPKL
VEEQVTYPLS TAMLAVPGAK TVRGFSMFGD SYVYVIFEDG TDIYWARSRV LEYLSQISSR
LPQGVQPSLG PDASGVGWVF EYALVDRSGS LDLSQLKSLQ DWYLKLELQS VAGVSEVATV
GGMEQTYQIV LEPDKMAIYK LDIASIKDAI EKSNSEAGGS VIEMAEAEYM VRAKGYRQTL
EDFREIPLGI TSPSGTGLLL KDVATVRKGP ASRRGIAELD GEGEVVGGII VMRYGENALS
TIDAVKAKLE ELKAGLPDGV EIIPTYDRSQ LILNSVDNLF SKVVEEMLVV GLVCLLFLLH
ARSTLVAIIT LPLSILIAFI VMNKMGVNAN IMSLGGIAIA IGAVVDGAIV MIENLHKHLE
QFHTEHNREP DTKEHWRIVT EASIEVGPAL FFSLIIITLS FVPVFALEAQ EGRLFAPLAY
TKSFAMAASA LLAITLVPVL MGYFIRGKIP SEHKNPISRV LIALYKPSLN LVLRFPKITL
ALALIALVSA WYPMTRMGSE FMPELEEGDL LYMPTALPGL SAGKAAEVLQ QTDRLIKTVP
EVARVFGKVG RAETATDPAP LTMLETTIML KPHEEWREGM TLDGIIAQLQ QTVKVPGITN
AWVQPIKTRI DMLSTGIKTP VGIKITGADV NELQSLGAEI EAILSRVPHT KSAYAERSGG
GRYIDITPKL DVAARYGMSL QDIQDVVRYA IGGMDIGESI QGAERYPINL RYPRELRDNI
EKLRELPVIT KSGNYLPLRN LADIEITDGA PMLTSENGRL ISWVFIDIEG TSIGEYITTA
KQALTAELKV PPRYSYTFAG QYEYMQRVDA KLKQVIPMAL GVIFILLMMT FGSTLQASII
MLSLPFALVG STWLLYLLDY NISVAVAVGM IALAGVAAEF GVIMLIYLNN AIKHRQEKNN
YHTVTDLKEA LIEGAVMRIR PKAMTVATIF FGLLPIMWGA GSGNDVMQKI AAPMVGGMVT
APILSLFVLP ALYLLIYSRQ LKKEAAPIS
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