Gene Sputcn32_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0171 
Symbol 
ID5079048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp198429 
End bp198833 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content50% 
IMG OID640497291 
ProductMerR family transcriptional regulator 
Protein accessionYP_001181706 
Protein GI146291282 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02051] Hg(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTAA CTTTGTATAC AATCGGCCAA TTAGCTAATG CAGCTGTCGT TAACGTTGAA 
ACTATCCGCT ACTACGAACG CCGCGGTCTT GTTGAACAGC CTGGTAAACC GACACAGGGG
TTTCGCCGGT ATCCTGTCAC TACCCTGAAT CGGCTTCGAT TTATCAAGCG GGCGCAGGAG
TTAGGGTTCA CACTGGAAGA AATCCATCAT CTGCTCACAC TCAATGATAC CCCATGTCAG
GGCGTTCAGG ACGTGGCCAC ACTCAAGCTT GCCAATGTCC GCTCAAAGAT TGCAGATCTG
CAGAGTCTGG AACTTGTTCT TCATCACCTG CTGAGCCAAT GCGCATCCAA TCCGGATCAG
ACCCATTGCC CCATTATCGA ATCCCTACAA CCACATAACA ACTAA
 
Protein sequence
MDVTLYTIGQ LANAAVVNVE TIRYYERRGL VEQPGKPTQG FRRYPVTTLN RLRFIKRAQE 
LGFTLEEIHH LLTLNDTPCQ GVQDVATLKL ANVRSKIADL QSLELVLHHL LSQCASNPDQ
THCPIIESLQ PHNN