| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0157 |
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| Symbol | |
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| ID | 5078983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 181665 |
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| End bp | 184955 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640497277 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001181692 |
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| Protein GI | 146291268 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACGA CAGTTAACTT CCAAGAAGAA TTCAGCGCTA AAGTGCCAGC TCTTACGCTG
TTAACGAACC TAGGTTACAC CTTTATTCCA CCAAGTAAAT GCGAAGCGCT GCGTGGAAAC
TCTCTAGTTA GCGAAAAGAA AAGCACTCAT CAGGTGGTTT TATTGCCCAT CATGCGTGCT
TTTTTAGCTA AACAAACATT TTCGTTTGCG GGTAAACAAC ATACATTATC AGAAGCAGCT
ATTGATAAAG TCATGCATGA GCTTACCCCT GCCATGAACT TAGGATTAAA AGCGGCTAAT
GAGAAAATCT ACAATGCATT GATGTATGGC GTTAGCGTTA CTGAGTTTAT AGATGGCAAA
AAAGCCTCCC CCACCATTAA GCTTGTTGAT TGGCACGATC TTGATAATAA CCAATTCCAT
TTTACTGAAG AGTTAGTGGT TCAAAATGCC GAAGGCACTG GTAATCGAAT TCCAGATATT
GTGTGTTTTG TGAATGGTTT GCCACTAGTC GTGATTGAGG CGAAACGCCC GGATTCAAAT
AAAGAAGGTA AATCGACCAA CGCTGAGGCA ATTTCACAGC ATATTCGTAA TCAAGGTCAG
GCTGAAATTC CTCATTTGTA TGCCTATAGC CAACTTCTAT TAGCAGTAAA TGGGCATGAA
GGTTTATATG CTACTTGCGG TACTCCTGAA AAGTTTTGGG CGAAGTGGAA GGAAGAACAA
ATCACTGAAG CTGAATTTGT CAGGTTGAAA AATCACAAAT TAAGCAATGA ACAAATAGGT
GGACTATTTA ATCATCGTCC TGCTAAAGCG AAAGATGACT ACCTATCTTT GGTTGCAGCA
GGTGACTTAA CCGTTACCGA TCAAGATAGG CTTATTGTTA GCTTGCTTCG CCCTGAGCGT
CTTCTTGATA TGACTCGCTT GTTTACCTTG TTCGATAAAA AAGCAGGCAA GATTGTCGCT
CGATATCAGC AGGTATTTGG CATAAAAGCA CTTATTGAGC GAATTAACAC GTTTGATGAT
TCAGGTGCTC GTGAAGGTGG TGTTATTTGG CACACCACAG GTAGCGGTAA GTCATTTACT
ATGGTGTTTT TATCCAAAGC GCTTACTTGG CTTGAAGAGC TTGCACAATG CCGAGTGATC
ATAGTTACAG ACCGTGTGGA CTTAGAAGAT CAACTAAGCA GAACCTTTGC ATCTGGCGGT
GTATTAACTG ACCGAGATAA AAAAGATGCG ATGGCGACCA CTGGTAAGCG TTTAGCTGAA
CAGATCGGTA AAGGTAATGA GCGAGTTATC TTCTCGATCA TTAATAAGTT TGGCTCAGCG
ATTAAATACA AAGAATGTTA CAACGACAGT CCAAACATTA TTGTACTTGT GGATGAAGGC
CACCGAAGTC AAAACGGTGA AAATAATATC CGTATGCAGC AGACGCTGCC TAAAGCTGCC
TATATTGCTT TTACGGGTAC GCCACTATTA AAGGACGATA AGACCGAAAA TAAATTCGGT
AAGATCATCC ACAGCTACAC CATGCAGCAA GCGGTTGAGG ATAAAACCGT AACCCCTCTT
TTGTATGAAG AGCGTATTCC AGAGCTGAAC GTTAATGACA AAGCCATTGA CGCTTGGTTT
GCGCGCAGCA CAAGCAAACT AAGTGATAAG CAAAAGACCG ACCTAAAGAA GAAGTTTTCT
CAAAAAGGTC AAATCTACCA AACCGAAGGT CGTATTGAAT TAATCGCATA CGATATTGCT
GACCATTTCC AGAACTTTAA ACAACAAGGC TTAAAAGGCC AGCTAGCTTG TGACTCCAAA
GCTTCTGCAA TCCGTTATAA GAAGGCATTG GATAAAATAG GCACGGTAAC ATCCGTTGTG
GCGATGTCGG CTCCTGATAC TCGTGAGGGT CACGAGGCTG TTGATCAAGA GAGTAAGGAT
ATCGTGCAAA ATTGGTGGAA AGCTAACGTA AATAAAATGG ACGAAAAAGC CTACACCAAG
GCTATTATTG AAGAGTACGG TAGAGATGAT GGCCCTGACA TCATGATCGT AGTTGATAAG
CTCCTGACAG GCTTTGACGA GCCAAAGAAC ACTGTGCTTT ACATCGATAA GCCTTTAAAA
GAGCACAACC TAATACAAGC AATTGCCCGT GTTAACCGAT TGCATAGTAA AAAGCAGTTT
GGTTACTTAA TCGATTACCG AGGCATTTTA AAAGAGCTTG ATACCACAAT AGAAAAGTAC
CAAGACCTTG CTGAGCGTAC CCAAGGCGGC TTTGACATTG ACGATCTGAA AGGTTTGTAT
AACCGCATGG ACACGGAATA CAAAAAGCTT CCGGGGCTGC ATAGCGATTT ATGGGCAATA
TTTGATACTG TTAAAAACAA ACAAGATGGC CCAGCGCTTC GCCAAGCGTT AGCGCCTAAG
GTGAATGATG TTGATGGCAA GCTTGTTGAT ACTAATCTTA AAAAACGTGA TGACTTCTAC
TCAGCACTAA CTGCATTTTC AAACTGTATG AAAGTAGCAT TGCAATCAGC AACCTACTTT
GAAGATAAGT CATTTGATAA TAAGCGTGAC TTGTACAAAC GTGATCTAAA AGCCTTTGTC
GATTTGCGTA AACAAGTGCG AGAAGATGCA GACGAAACCA TTAATTATGA TGAATACGCT
GAAGATATTC GCAGCCTTCT AGACAAGCAC ATAGCTGGTA TTGAAGTGAA AGAGCCTGAC
GGTGCGTACT TGGTCGGCAA TTTAGGGAAA GACGTTAAGC CACAGGATAT GAGCGATGAT
GAGGCTCGAA ACCAAACAGA TAAAATCACA GGCCGAATCA CTAAGATGAT TGAGCAAGAT
TTAGCAGATG ATCCTTATGC ACAGGAATAT TTCTCCAAGA TGCTTAAAAA GGCAATTGAA
GATGCTAAAG CTATGTTTGA TGCGCCAGTT AAGCAGTACA TCCTTTTTGC TGACTTTGAG
CAAGAAGTGA AAGAACGCAA TGTGGCTGAT GTTCCCAATG GCTTTGTAGA TGACTCCGGC
AAGTTAAATA AACATGCACA AGCCTATTTT GGTTTGTTTA AGCACCTATT TGATGCTGAG
TTCTTGAATG ATAAAGCCTT AGATAACGAT AAACTCGTAG CGTTAGCGTT TAGCATCGAT
GATGTGGTGA ATACTGCTGT TGCTGAGTAT TCAATCAATC CTGCGGAGAT TGAAAACGCT
ATTCACATGA AACTGTTGCC GCTGTTATTT GCTGATCTTG GTCTTGAGAA CGCTCAAAAG
TTGATTGAAG AAGTGCTTAA GATCACTCGC TTAGGCTTGG CAAGAGGCTA A
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| Protein sequence | MTTTVNFQEE FSAKVPALTL LTNLGYTFIP PSKCEALRGN SLVSEKKSTH QVVLLPIMRA
FLAKQTFSFA GKQHTLSEAA IDKVMHELTP AMNLGLKAAN EKIYNALMYG VSVTEFIDGK
KASPTIKLVD WHDLDNNQFH FTEELVVQNA EGTGNRIPDI VCFVNGLPLV VIEAKRPDSN
KEGKSTNAEA ISQHIRNQGQ AEIPHLYAYS QLLLAVNGHE GLYATCGTPE KFWAKWKEEQ
ITEAEFVRLK NHKLSNEQIG GLFNHRPAKA KDDYLSLVAA GDLTVTDQDR LIVSLLRPER
LLDMTRLFTL FDKKAGKIVA RYQQVFGIKA LIERINTFDD SGAREGGVIW HTTGSGKSFT
MVFLSKALTW LEELAQCRVI IVTDRVDLED QLSRTFASGG VLTDRDKKDA MATTGKRLAE
QIGKGNERVI FSIINKFGSA IKYKECYNDS PNIIVLVDEG HRSQNGENNI RMQQTLPKAA
YIAFTGTPLL KDDKTENKFG KIIHSYTMQQ AVEDKTVTPL LYEERIPELN VNDKAIDAWF
ARSTSKLSDK QKTDLKKKFS QKGQIYQTEG RIELIAYDIA DHFQNFKQQG LKGQLACDSK
ASAIRYKKAL DKIGTVTSVV AMSAPDTREG HEAVDQESKD IVQNWWKANV NKMDEKAYTK
AIIEEYGRDD GPDIMIVVDK LLTGFDEPKN TVLYIDKPLK EHNLIQAIAR VNRLHSKKQF
GYLIDYRGIL KELDTTIEKY QDLAERTQGG FDIDDLKGLY NRMDTEYKKL PGLHSDLWAI
FDTVKNKQDG PALRQALAPK VNDVDGKLVD TNLKKRDDFY SALTAFSNCM KVALQSATYF
EDKSFDNKRD LYKRDLKAFV DLRKQVREDA DETINYDEYA EDIRSLLDKH IAGIEVKEPD
GAYLVGNLGK DVKPQDMSDD EARNQTDKIT GRITKMIEQD LADDPYAQEY FSKMLKKAIE
DAKAMFDAPV KQYILFADFE QEVKERNVAD VPNGFVDDSG KLNKHAQAYF GLFKHLFDAE
FLNDKALDND KLVALAFSID DVVNTAVAEY SINPAEIENA IHMKLLPLLF ADLGLENAQK
LIEEVLKITR LGLARG
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