| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0147 |
|---|
| Symbol | |
|---|
| ID | 5078973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 168674 |
|---|
| End bp | 170233 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640497267 |
|---|
| Product | AbgT putative transporter |
|---|
| Protein accession | YP_001181682 |
|---|
| Protein GI | 146291258 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
|---|
| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATC ATAAATCTGC CACCGGATTC CAGCGATTTC TCAATACGGT AGAAACTGTA
GGAAATAAAC TTCCAGATCC CGCCGTATTA TTTGCCATGT TTTTAGGCTT GGTCTGGCTG
ATCTCTTGGT GGTTATCTGG CGTCAGTTTT GATGAGATCG ATCCCCGTAG TGGCAACCCC
ATTCAAATTG TCAATATGTT AGATGGCGCG GCATTAACCG CTTTTACATC AACGATGGTG
TCGACCTTTG TGACCTTCCC GCCGCTAGGT GTTGTGCTTG TTGCTATGCT CGGCCTTGGT
GTTGCTGAGC ATACGGGCTT TATTAATGCT GGGCTGCGTT CCATTTTATC TGTTACCCCA
AAAATGTTGC TGACTCCGGT ACTGATCGCC GTAGGAATTC TGAGCCATGT TGCAGTGGAT
GCAGGTTATG TGCTCGTTAT CCCGCTCGGT GCGGTGATTT TTTATGCCGC AGGCCGTCAT
CCCTTGGCGG GGATTGCCTC GGCGTTTGCG GGCGTATCTG GTGGTTTTTC GGCAACGGTT
GGTGTGCCAT CGAGTCTTGA TCCTATGTTA GCGGGGTTAA CGCAAGCGGC GGCAAGATTA
TCGGCCGATC CCGCTGCCGC AGATCTCACC ATTAACCCAC TGAATAACAT CTTCTTTACC
TCAGCGTCAG CCCTCTTAAT TATCTTAGTT GGCTGGTTCA TTACCGATAA AATCATCGAA
CCACGCCTGA AAAACACCAC AGTGAATGGC GATCCAGCGA CACTCCCAAC CCTAGATGAA
CTTCAGCCCC ATGAGCGCCG CGGACTGAGA TTTGCCATGG CTTCCATGTT GTTTTGTGCT
TTAGCCCTAG TATTAACCGC CTACGGAGAT CACTCCGCTT GGCGTGGTGA AGACGGGGCA
CTCACCAGTG CTTCAGCGCC TTTAATGCGG TCAATTGTGG CGATTATTTT TGTGTTCTTC
CTCATCCCCG GCATAGTGTA TGGCTATGCC GCAGGTACGG CTAATAATCA CAGAGCCATT
ATTCAGGGTA TGAGCAAATC CATGAGTGGC ATGGGTTATT ACATCGTTAT GGCCTTTTTC
TGTGCGCAAT TTATTTATGC TTTCGGCCAA TCCAATTTAG GGGCGTTAAT GGCGATTAAA
GGCGCATTGG CGTTAAAAGA GTTAGCCCTT CCTATGGGGG TTACGCTAGT CGGCATTGTA
TTTCTCACCG CGTTAGTCAA TCTATTAGTG GGCTCCGCAT CGGCGAAATG GGCGCTTATT
GGTGCCATTA TGGTGCCAAT GTTAATGGAA CTAGGCGTAT CACCCGATTT GACTCAAGCC
GCTTATCGAG TGGGCGATTC ATCAACCAAT ATCATCACAC CGCTAATGCC TTACTTTCCA
TTGATTGTGG TGTTCTGCCA AAAATACGTT AAGGAATCGG GCATAGGTAC CCTAGTGGCG
CTCATGTTAC CGTTTTCAAT CAGTTTTCTA TTGCTATGGA GCGGTTTCTT GCTGGGATAT
TGGGCATTAG GCTTACCGTT AGGTATCGGC AGTTCACTCA CTTTCCCTGC TTTACCATAA
|
|---|
| Protein sequence | MVNHKSATGF QRFLNTVETV GNKLPDPAVL FAMFLGLVWL ISWWLSGVSF DEIDPRSGNP
IQIVNMLDGA ALTAFTSTMV STFVTFPPLG VVLVAMLGLG VAEHTGFINA GLRSILSVTP
KMLLTPVLIA VGILSHVAVD AGYVLVIPLG AVIFYAAGRH PLAGIASAFA GVSGGFSATV
GVPSSLDPML AGLTQAAARL SADPAAADLT INPLNNIFFT SASALLIILV GWFITDKIIE
PRLKNTTVNG DPATLPTLDE LQPHERRGLR FAMASMLFCA LALVLTAYGD HSAWRGEDGA
LTSASAPLMR SIVAIIFVFF LIPGIVYGYA AGTANNHRAI IQGMSKSMSG MGYYIVMAFF
CAQFIYAFGQ SNLGALMAIK GALALKELAL PMGVTLVGIV FLTALVNLLV GSASAKWALI
GAIMVPMLME LGVSPDLTQA AYRVGDSSTN IITPLMPYFP LIVVFCQKYV KESGIGTLVA
LMLPFSISFL LLWSGFLLGY WALGLPLGIG SSLTFPALP
|
|---|
| |