Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0106 |
Symbol | |
ID | 5078881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 121532 |
End bp | 123718 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640497226 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001181641 |
Protein GI | 146291217 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCCCC TATCTGTTTT TATACAGTGG CGTTTGCCAT TAATTCCCGT TTTACTCTGT GCTCTGACTG TCGCTGCGCA AGCCAATACA GACCCAACGC CAGAAGAAAA AAACGATACT GAACAGATAG AAAGAGTAAG TGTGGTTGGA ACTTATACTC GAGCCGCCAT GAATAGCGCC ACGGGTTTAT CTATGTCTCT CAAAGAAACG CCACAAAGCG TTACCTTAAT TACCGAGGAA ATGATCAGCG ATAAAGGGTT GGTCACTATG GAATCAGTAC TGAACCATAC TCCTGGTGTC ACTATGGTGG GCGATGCCTC AGAAAACAGC CAAATCTTTG TACGCGGTTA TGCACTCGAC AGTGGGGTGC AAATTGATGG CTTAATTACG ACGTCCTCAT CCCATGTTTA CAGCGGCTCC ATCGACCAAG GTTTAGATCC TGTGATTGCC GAACGGGTTG AAGTATTAAA AGGGGCGGCA GGTATTTTAA GCGGTTTAGG AGAACCCTCT GCAACGGTCA ATTTTATTCG TAAGCGTCCA ACAGATGACA CTCGTGCAAC CATCAGTGCG AGTTATGGTT CATGGGATAC TTATCGCTTA GAGGCTGATA TTTCGGGCTG GCTAACGGAT TCGGGTAGTG TCAAAGGTCG ATTCGTTAGC GCGGTCAAAA AAGGTAACTC GTTTATTGAT CGTTATCAGC GCGATACCAC TGTGCTCTAC GGGGTCGTAG AAACCAACTT AGCAACAGAT ACTAGCCTGT CATTTTTTGC TGACTATCAA AAATCACAAA CCGATGGCGT ATATAACTGG AACTCTAATC CTGCATTTTA TACCGATGGC ACGGCTGTCG ATTTCGGTCG TAGCTATTCC AGCTCACAGG ACTGGACCCA CTGGGATGTC ACTCAAAAAA GTGTAATGGC TGAATTTAAA CATAGATTTG ATAACGATTG GTCACTCGTT AGTGCTTATC GCATCGCTAA TGCCACCATA GATGCCTTAG CCTTTTATCC CGGTGATTAC ATTGTCAAAG CAACCGGAGA ATTTGTTGGC CCTTGGGGCG ATACCTATTC AGCCCAACAT GACCGCGAAT CTGATACTAA TAGTTTTAAC CTCTACACTA CGGGCACCTT TGATTTATTC GGCCGTGAAC ACAGTGCTGT GGCGGGCTTT AACTATGGTG ATAACGTATT TGACAATATC AATACCAACT CAACACCCCA GCGCCGCTAT CATTTGAACG ATCAGGGTCA TTACCCTAAA CCATCCCTTC CTGACTCCCC GAGCAATGGC CAATCTAACG AACAAAGCCA ATCAGGTGTA TATGGCACAA TTCGCATCAA TGTATTGGAC TCATTGAAAT TTATGCTAGG CGGGCGAGTC AGTGATTGGT CTTATGAAAA GCATGATCTC GTTGGTAACA GTGCCGATGC CACTATGGAA AAAAACGGCA TCTTCATCCC TTACTATGGT CTTGTTTATG ATGTGACAGA GATCGTTTCT GTCTATGCCA GTCGTACTGA AATTTTCAAA CCCGGGACCT ATTTCGGTGA AGACGGCCAA CTACTTGAGC CTGCTGAAGG CACCAATATT GAAGCCGGTA TTAAGATGGC ACTCTTCGAT GACACATTAA ATATGTCTGC CGCCATTTAT GAAACCAATA AAGACAATGA ACCTGAGTAT GCGGGCAAGG GCCAGCTACC CTCGGGGGAC TATATTTATC AAAGCGTTGA TGGCATCACA ACTAAAGGCT ATGAGTTTGA AATTGCAGGG CGTCTTACTG ACAACTGGGA TATTAGCGGT GGTTATACCC ACAACAGCGC AGAAGATAAA AATGGTTTAC GTCGCCAGAC CTATTTACCC GAAGACATTT TTAAACTAAC GACTAAATAT AACTTCGAAG ACTATCTCCC GGGAACCACC GCGGGGGTAA GTTGGCGCTG GCAAAGTAGT AGTTATTATG AAGGCACAAT TTGGGGCGTA GATGGTGCAC CTAATGTGGC TTATCGCCAA GAACAATCGG CTTATTCACT TATCGATTTG ATGTTTGGTT ACGAAATAAC CCCTTCTATT TCAATGCAGG TCAACATCAA TAATATTTTT GACAAGCATT ACAACCGCTC ACTCTGGGGT TATTCAGACT TTGGCGAGCC CCGTAATGCG ACCATCTCAT TACGCTGGTC ACTTTGA
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Protein sequence | MPPLSVFIQW RLPLIPVLLC ALTVAAQANT DPTPEEKNDT EQIERVSVVG TYTRAAMNSA TGLSMSLKET PQSVTLITEE MISDKGLVTM ESVLNHTPGV TMVGDASENS QIFVRGYALD SGVQIDGLIT TSSSHVYSGS IDQGLDPVIA ERVEVLKGAA GILSGLGEPS ATVNFIRKRP TDDTRATISA SYGSWDTYRL EADISGWLTD SGSVKGRFVS AVKKGNSFID RYQRDTTVLY GVVETNLATD TSLSFFADYQ KSQTDGVYNW NSNPAFYTDG TAVDFGRSYS SSQDWTHWDV TQKSVMAEFK HRFDNDWSLV SAYRIANATI DALAFYPGDY IVKATGEFVG PWGDTYSAQH DRESDTNSFN LYTTGTFDLF GREHSAVAGF NYGDNVFDNI NTNSTPQRRY HLNDQGHYPK PSLPDSPSNG QSNEQSQSGV YGTIRINVLD SLKFMLGGRV SDWSYEKHDL VGNSADATME KNGIFIPYYG LVYDVTEIVS VYASRTEIFK PGTYFGEDGQ LLEPAEGTNI EAGIKMALFD DTLNMSAAIY ETNKDNEPEY AGKGQLPSGD YIYQSVDGIT TKGYEFEIAG RLTDNWDISG GYTHNSAEDK NGLRRQTYLP EDIFKLTTKY NFEDYLPGTT AGVSWRWQSS SYYEGTIWGV DGAPNVAYRQ EQSAYSLIDL MFGYEITPSI SMQVNINNIF DKHYNRSLWG YSDFGEPRNA TISLRWSL
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