Gene Sputcn32_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0106 
Symbol 
ID5078881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp121532 
End bp123718 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content45% 
IMG OID640497226 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001181641 
Protein GI146291217 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCCCC TATCTGTTTT TATACAGTGG CGTTTGCCAT TAATTCCCGT TTTACTCTGT 
GCTCTGACTG TCGCTGCGCA AGCCAATACA GACCCAACGC CAGAAGAAAA AAACGATACT
GAACAGATAG AAAGAGTAAG TGTGGTTGGA ACTTATACTC GAGCCGCCAT GAATAGCGCC
ACGGGTTTAT CTATGTCTCT CAAAGAAACG CCACAAAGCG TTACCTTAAT TACCGAGGAA
ATGATCAGCG ATAAAGGGTT GGTCACTATG GAATCAGTAC TGAACCATAC TCCTGGTGTC
ACTATGGTGG GCGATGCCTC AGAAAACAGC CAAATCTTTG TACGCGGTTA TGCACTCGAC
AGTGGGGTGC AAATTGATGG CTTAATTACG ACGTCCTCAT CCCATGTTTA CAGCGGCTCC
ATCGACCAAG GTTTAGATCC TGTGATTGCC GAACGGGTTG AAGTATTAAA AGGGGCGGCA
GGTATTTTAA GCGGTTTAGG AGAACCCTCT GCAACGGTCA ATTTTATTCG TAAGCGTCCA
ACAGATGACA CTCGTGCAAC CATCAGTGCG AGTTATGGTT CATGGGATAC TTATCGCTTA
GAGGCTGATA TTTCGGGCTG GCTAACGGAT TCGGGTAGTG TCAAAGGTCG ATTCGTTAGC
GCGGTCAAAA AAGGTAACTC GTTTATTGAT CGTTATCAGC GCGATACCAC TGTGCTCTAC
GGGGTCGTAG AAACCAACTT AGCAACAGAT ACTAGCCTGT CATTTTTTGC TGACTATCAA
AAATCACAAA CCGATGGCGT ATATAACTGG AACTCTAATC CTGCATTTTA TACCGATGGC
ACGGCTGTCG ATTTCGGTCG TAGCTATTCC AGCTCACAGG ACTGGACCCA CTGGGATGTC
ACTCAAAAAA GTGTAATGGC TGAATTTAAA CATAGATTTG ATAACGATTG GTCACTCGTT
AGTGCTTATC GCATCGCTAA TGCCACCATA GATGCCTTAG CCTTTTATCC CGGTGATTAC
ATTGTCAAAG CAACCGGAGA ATTTGTTGGC CCTTGGGGCG ATACCTATTC AGCCCAACAT
GACCGCGAAT CTGATACTAA TAGTTTTAAC CTCTACACTA CGGGCACCTT TGATTTATTC
GGCCGTGAAC ACAGTGCTGT GGCGGGCTTT AACTATGGTG ATAACGTATT TGACAATATC
AATACCAACT CAACACCCCA GCGCCGCTAT CATTTGAACG ATCAGGGTCA TTACCCTAAA
CCATCCCTTC CTGACTCCCC GAGCAATGGC CAATCTAACG AACAAAGCCA ATCAGGTGTA
TATGGCACAA TTCGCATCAA TGTATTGGAC TCATTGAAAT TTATGCTAGG CGGGCGAGTC
AGTGATTGGT CTTATGAAAA GCATGATCTC GTTGGTAACA GTGCCGATGC CACTATGGAA
AAAAACGGCA TCTTCATCCC TTACTATGGT CTTGTTTATG ATGTGACAGA GATCGTTTCT
GTCTATGCCA GTCGTACTGA AATTTTCAAA CCCGGGACCT ATTTCGGTGA AGACGGCCAA
CTACTTGAGC CTGCTGAAGG CACCAATATT GAAGCCGGTA TTAAGATGGC ACTCTTCGAT
GACACATTAA ATATGTCTGC CGCCATTTAT GAAACCAATA AAGACAATGA ACCTGAGTAT
GCGGGCAAGG GCCAGCTACC CTCGGGGGAC TATATTTATC AAAGCGTTGA TGGCATCACA
ACTAAAGGCT ATGAGTTTGA AATTGCAGGG CGTCTTACTG ACAACTGGGA TATTAGCGGT
GGTTATACCC ACAACAGCGC AGAAGATAAA AATGGTTTAC GTCGCCAGAC CTATTTACCC
GAAGACATTT TTAAACTAAC GACTAAATAT AACTTCGAAG ACTATCTCCC GGGAACCACC
GCGGGGGTAA GTTGGCGCTG GCAAAGTAGT AGTTATTATG AAGGCACAAT TTGGGGCGTA
GATGGTGCAC CTAATGTGGC TTATCGCCAA GAACAATCGG CTTATTCACT TATCGATTTG
ATGTTTGGTT ACGAAATAAC CCCTTCTATT TCAATGCAGG TCAACATCAA TAATATTTTT
GACAAGCATT ACAACCGCTC ACTCTGGGGT TATTCAGACT TTGGCGAGCC CCGTAATGCG
ACCATCTCAT TACGCTGGTC ACTTTGA
 
Protein sequence
MPPLSVFIQW RLPLIPVLLC ALTVAAQANT DPTPEEKNDT EQIERVSVVG TYTRAAMNSA 
TGLSMSLKET PQSVTLITEE MISDKGLVTM ESVLNHTPGV TMVGDASENS QIFVRGYALD
SGVQIDGLIT TSSSHVYSGS IDQGLDPVIA ERVEVLKGAA GILSGLGEPS ATVNFIRKRP
TDDTRATISA SYGSWDTYRL EADISGWLTD SGSVKGRFVS AVKKGNSFID RYQRDTTVLY
GVVETNLATD TSLSFFADYQ KSQTDGVYNW NSNPAFYTDG TAVDFGRSYS SSQDWTHWDV
TQKSVMAEFK HRFDNDWSLV SAYRIANATI DALAFYPGDY IVKATGEFVG PWGDTYSAQH
DRESDTNSFN LYTTGTFDLF GREHSAVAGF NYGDNVFDNI NTNSTPQRRY HLNDQGHYPK
PSLPDSPSNG QSNEQSQSGV YGTIRINVLD SLKFMLGGRV SDWSYEKHDL VGNSADATME
KNGIFIPYYG LVYDVTEIVS VYASRTEIFK PGTYFGEDGQ LLEPAEGTNI EAGIKMALFD
DTLNMSAAIY ETNKDNEPEY AGKGQLPSGD YIYQSVDGIT TKGYEFEIAG RLTDNWDISG
GYTHNSAEDK NGLRRQTYLP EDIFKLTTKY NFEDYLPGTT AGVSWRWQSS SYYEGTIWGV
DGAPNVAYRQ EQSAYSLIDL MFGYEITPSI SMQVNINNIF DKHYNRSLWG YSDFGEPRNA
TISLRWSL