Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0088 |
Symbol | |
ID | 5078863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 100033 |
End bp | 100563 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640497208 |
Product | hypothetical protein |
Protein accession | YP_001181623 |
Protein GI | 146291199 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTGT ATTTTCGTTT GTTTTGGTTG TTATTTTGGC GTACGCGCCA TTGTCGTAAG ATCGATTTTC TAGGCACAAG TCGTATCACT TATCGTGCTT TACCGAGCGA TTGTGACATC AATTTCCATC TGACTAACTC CCGCTATCCC GCATTTATGG ATCTGGCGCG GACCTATATG CTCGCCGAGA TGGGTCTACT GAAACGCTTC TTAAAGTTGA AGTGGATGCC GATAGTCAAC GCCGCCGAAT TTACCTATAT TCGCGATATC AAGCCGCTAA AAACCTTTGA AATTGAAACC AAAGTTGTTG GTTGGGATGA AAAGTATTTT TATATCGAAC AGCGCTTTGT GAGCGAACGT GGCCTGCATT GTATCGTGCA TGTACGCGGC GTGTTTGTGT GCAAAGGTAA GCAGGTGCCG CTCGATGTAT TAGTGAAAGA GGCGGGTTAT ACCGATCCTG CACCTGAGTT GCCGCCAGAA GTGGTGAAGT GGAAAGCGTT TTTGCAGTTA AAAAAAGAAC GTAATATGTG A
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Protein sequence | MNLYFRLFWL LFWRTRHCRK IDFLGTSRIT YRALPSDCDI NFHLTNSRYP AFMDLARTYM LAEMGLLKRF LKLKWMPIVN AAEFTYIRDI KPLKTFEIET KVVGWDEKYF YIEQRFVSER GLHCIVHVRG VFVCKGKQVP LDVLVKEAGY TDPAPELPPE VVKWKAFLQL KKERNM
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