Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0058 |
Symbol | |
ID | 5078785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 66600 |
End bp | 66971 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640497178 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_001181593 |
Protein GI | 146291169 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAC TTTTAAATGT CAACCCCAGT AGTGGCGAAC CCATCTATAA ACAATTACAC GAGCAAATCG TGCGCTTAAT TGTGGGTGGT CAACTGCAAG TGGAAGACGT ATTACCCTCT GTACGCCAAA TTGCCGAGCA TTTAGCCGTA AATCCCATGA CCGTTTCCAG GGCGATTCAA CAACTTGTCG ATCAAGGTTG GCTCGAACGC CGCCGTGGTC AAGCGACAAA AGTCGCGTTG CGAACAGAAA CAATGGCATC GGGTATCAGT CTGCTCGAAC CCCAGCTCGA TGCCTTGTTA TCACAGGCAA AACAGTTAGG CGTCAGCTTG CCTGAGTTGC AGCAACTGCT GAACGAACGC TGGCAAGATT AG
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Protein sequence | MLELLNVNPS SGEPIYKQLH EQIVRLIVGG QLQVEDVLPS VRQIAEHLAV NPMTVSRAIQ QLVDQGWLER RRGQATKVAL RTETMASGIS LLEPQLDALL SQAKQLGVSL PELQQLLNER WQD
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