Gene Sputcn32_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0049 
Symbol 
ID5078776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp57345 
End bp58391 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content43% 
IMG OID640497169 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001181584 
Protein GI146291160 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.230731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAT CCATAGCCGT ACCTATGACT CAATACTGGC GTTCACATCC ATCTTCATTC 
ACCTTCGTTG TGTTAGTCAT CGCCATTTTC AGCAGTTTTT TTATTGATTT GCTCTCAGGC
TCAACCATCG CCGTGTTACT GATTTTGCAA CTCGCTGTGG TGGTTGTCGC CCTACAATGT
AATGCCCATT ACGCCTATTT TACTGCAGTG TATGAAGCGG CAAGTTATAA CTTTTTATTT
ACCACACCGC GCTATTCGCT ACAGATGTTT AATCTTGAGG ATATTCTTAA CTTAGCCGTA
TTTCTCTTAG TAGCGCTCAC CACCAGCAAA CTGGCGGAAC TTTATCGGCG TCAGCAAGAT
GCACTTGAAC AAGCCCAGTT ACGTAATAGT ATTTTGCTGT CGGTCTCCCA CGATTTACGT
ACTCCACTCG CCACCATTAT TGGCACTTTA ACTACGCTAA AAGAATATAT GCCTAAGCTG
AGCCCATCCC AAAAAGATGA GCTAATTGAC AGCGCTGCGG CAGAAAGCCA CCGTCTGCAC
CAATATATCG AAAATCTATT ACAGGCCACT AAATTACAGC ATGGCGCACT CAAGTTTAGT
TTGAATGAAG ACTCTATTAC TCATGTGTTA CACCAAGCTA TTGCCCGTTT TCCGGCCACA
CAACCACGCA TTGTTATCAA GAGTGAATCA GAGCTACCCA CAGTGATGAT ATGCAGTTCA
TTGATTGAGC AAGCTATTTT TAATGTACTG GACAATGCAT TGTGCTACTC ACCACAAGAT
GAAAAAGTCA CCGTTAAGGT TTATCGGTAT GAAAATATGT TGAGATTGGA TATCCAAGAT
CAAGGCTGCG GTATAGCCAC CGCAGATATG GAAGCCATTT TTGAACTCTT TTATCGCCAA
CATCCATCAA CGGATGGTGG TGCTGGTCTA GGTTTGGCTG TTGCGAAAGG AATTATTACC
GCACACCAAG GCCAAATCAG CGCCGAACCT GTCACTAAGG GCAGCCTTAT TCGTATTGCT
TTGCCGATAA AAAAGGACTG TGAATAA
 
Protein sequence
MTSSIAVPMT QYWRSHPSSF TFVVLVIAIF SSFFIDLLSG STIAVLLILQ LAVVVVALQC 
NAHYAYFTAV YEAASYNFLF TTPRYSLQMF NLEDILNLAV FLLVALTTSK LAELYRRQQD
ALEQAQLRNS ILLSVSHDLR TPLATIIGTL TTLKEYMPKL SPSQKDELID SAAAESHRLH
QYIENLLQAT KLQHGALKFS LNEDSITHVL HQAIARFPAT QPRIVIKSES ELPTVMICSS
LIEQAIFNVL DNALCYSPQD EKVTVKVYRY ENMLRLDIQD QGCGIATADM EAIFELFYRQ
HPSTDGGAGL GLAVAKGIIT AHQGQISAEP VTKGSLIRIA LPIKKDCE