Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0049 |
Symbol | |
ID | 5078776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 57345 |
End bp | 58391 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640497169 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001181584 |
Protein GI | 146291160 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.230731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCAT CCATAGCCGT ACCTATGACT CAATACTGGC GTTCACATCC ATCTTCATTC ACCTTCGTTG TGTTAGTCAT CGCCATTTTC AGCAGTTTTT TTATTGATTT GCTCTCAGGC TCAACCATCG CCGTGTTACT GATTTTGCAA CTCGCTGTGG TGGTTGTCGC CCTACAATGT AATGCCCATT ACGCCTATTT TACTGCAGTG TATGAAGCGG CAAGTTATAA CTTTTTATTT ACCACACCGC GCTATTCGCT ACAGATGTTT AATCTTGAGG ATATTCTTAA CTTAGCCGTA TTTCTCTTAG TAGCGCTCAC CACCAGCAAA CTGGCGGAAC TTTATCGGCG TCAGCAAGAT GCACTTGAAC AAGCCCAGTT ACGTAATAGT ATTTTGCTGT CGGTCTCCCA CGATTTACGT ACTCCACTCG CCACCATTAT TGGCACTTTA ACTACGCTAA AAGAATATAT GCCTAAGCTG AGCCCATCCC AAAAAGATGA GCTAATTGAC AGCGCTGCGG CAGAAAGCCA CCGTCTGCAC CAATATATCG AAAATCTATT ACAGGCCACT AAATTACAGC ATGGCGCACT CAAGTTTAGT TTGAATGAAG ACTCTATTAC TCATGTGTTA CACCAAGCTA TTGCCCGTTT TCCGGCCACA CAACCACGCA TTGTTATCAA GAGTGAATCA GAGCTACCCA CAGTGATGAT ATGCAGTTCA TTGATTGAGC AAGCTATTTT TAATGTACTG GACAATGCAT TGTGCTACTC ACCACAAGAT GAAAAAGTCA CCGTTAAGGT TTATCGGTAT GAAAATATGT TGAGATTGGA TATCCAAGAT CAAGGCTGCG GTATAGCCAC CGCAGATATG GAAGCCATTT TTGAACTCTT TTATCGCCAA CATCCATCAA CGGATGGTGG TGCTGGTCTA GGTTTGGCTG TTGCGAAAGG AATTATTACC GCACACCAAG GCCAAATCAG CGCCGAACCT GTCACTAAGG GCAGCCTTAT TCGTATTGCT TTGCCGATAA AAAAGGACTG TGAATAA
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Protein sequence | MTSSIAVPMT QYWRSHPSSF TFVVLVIAIF SSFFIDLLSG STIAVLLILQ LAVVVVALQC NAHYAYFTAV YEAASYNFLF TTPRYSLQMF NLEDILNLAV FLLVALTTSK LAELYRRQQD ALEQAQLRNS ILLSVSHDLR TPLATIIGTL TTLKEYMPKL SPSQKDELID SAAAESHRLH QYIENLLQAT KLQHGALKFS LNEDSITHVL HQAIARFPAT QPRIVIKSES ELPTVMICSS LIEQAIFNVL DNALCYSPQD EKVTVKVYRY ENMLRLDIQD QGCGIATADM EAIFELFYRQ HPSTDGGAGL GLAVAKGIIT AHQGQISAEP VTKGSLIRIA LPIKKDCE
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