| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0048 |
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| Symbol | |
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| ID | 5078775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 56655 |
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| End bp | 57344 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640497168 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001181583 |
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| Protein GI | 146291159 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTACA AAGTGTTAGT GGTGGATGAT GAAGCGCAAA TCCACACATT TATGCGAATA
TCCTTAGAAG CAGAAGGCTT TGAATATATT GGCGCATCAT CAATAACCAC AGCCCTTGCC
CAATATCGGG GACAGCAACC ACACATATTG ATACTCGACC TTGGATTACC GGATGGTGAT
GGTATTGAGC TACTACAAAC CCTAAGGCGA AACGACAAAA TCCCCGTATT GGTGTTAACT
GCCCGCGATC AAGAGGAAGA GAAAATTCGC CTATTAGACG CTGGCGCCAA TGACTATCTC
AGCAAGCCTT TTGGGATAAG AGAATTAATT GCCCGTATCA AAGTATTAGT CCGCGATTTA
GTGGACGAGT CATCTTTAAG TGATGTGCTG CACTTTGCCA CACTTAAGCT ACAAAAAAGC
ACCCACCAGC TTTGGATCAA TAAGCAAGAA ATCGCTTTGA CCAAAAAGGA ATTCGCCCTG
ATGGAGACCT TAATGTCTCC CCCTGGTCAG TTAGTCAAGC AAACTGTATT ACTGCGAAAA
ATTTGGGGCG AAACCCATCA AGAAGACAGT CACTATCTGC GGATTTTAGT CAGCCAGTTA
CGCAAAAAAC TCAATGACAA TAACGAGCAG CAACTGATTA AAACAGAAGC GGGTTTAGGT
TACCGCTTAA CAGACATCAA TCAGCAGTAA
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| Protein sequence | MAYKVLVVDD EAQIHTFMRI SLEAEGFEYI GASSITTALA QYRGQQPHIL ILDLGLPDGD
GIELLQTLRR NDKIPVLVLT ARDQEEEKIR LLDAGANDYL SKPFGIRELI ARIKVLVRDL
VDESSLSDVL HFATLKLQKS THQLWINKQE IALTKKEFAL METLMSPPGQ LVKQTVLLRK
IWGETHQEDS HYLRILVSQL RKKLNDNNEQ QLIKTEAGLG YRLTDINQQ
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