| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0047 |
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| Symbol | |
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| ID | 5078774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 55914 |
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| End bp | 56612 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497167 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001181582 |
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| Protein GI | 146291158 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCATT TTACCGTTAT TGGTTTAGGG CGATTTGGCG TTGCAGCCAG CCTTGAATTG
ATCCACTTAG GCCACACGGT CACAGGTGTC GACAGTGACC CTAAAATGGT TGAAAAATAT
GTAGAGAACC TAACTGAAGC CGTGATTTGC GACTGTTCCG ATGAGGCATC GCTGCGTGAG
CTTGACCTCA ACAACAGCGA AGCCGTACTT GTCGCTATCG GTGAGGATAT GCAATCCAGC
CTACTATGCA CCTTGGCGCT TAAGAATCTG GGTGTGCAAA CCATTTGGGT CAAGGCTAGC
ACTAAAGCGC ATCACACTAT CGTGTCAAAA CTCGGCGTTG CACGCATCAT TCACCCTGAA
GAAGAAATGG GGATACGTGT CGCTCAGTCG CTCAATTATC CTATGGTCAA TAACTTTCTC
GCCATTGGTG ATGGACTATA TATTGTTGAA ATTCATATTA AACCCCACCT AGATAAAACC
ACCGTTGCCC AACTTCTAGG CTCAGTTCAA GATGGTTTTA GTGATGAATT AACCAATATA
AAGCGCAACC CTAAAGGTAA AGTTGCAGCC ATTATGGTTA AACGTGATTT AGCGGTATTT
AGCAAGATCG ATGGTAGTTT TGTGTTGCAA GCTAACGATG CATTGTTGCT ATGTGGTAGC
CGTAGCGAGC TTAAATATCT CGCACCAAGG TTGGTGTAA
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| Protein sequence | MAHFTVIGLG RFGVAASLEL IHLGHTVTGV DSDPKMVEKY VENLTEAVIC DCSDEASLRE
LDLNNSEAVL VAIGEDMQSS LLCTLALKNL GVQTIWVKAS TKAHHTIVSK LGVARIIHPE
EEMGIRVAQS LNYPMVNNFL AIGDGLYIVE IHIKPHLDKT TVAQLLGSVQ DGFSDELTNI
KRNPKGKVAA IMVKRDLAVF SKIDGSFVLQ ANDALLLCGS RSELKYLAPR LV
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