| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0046 |
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| Symbol | |
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| ID | 5078773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 54548 |
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| End bp | 55912 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497166 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001181581 |
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| Protein GI | 146291157 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTCAAT GGCATCCCTC CATCATGGCA ATAGAACATC ATCCAAGGTC GGATAGAAAA
CTGTTCGGTG CGCCACCCTT TATTTTAAGC GTGAGCTTTG CACTACTGAT CATCCTTGGT
ACTTGCTTAC TGAAACTGCC CATAGCGACC GAAGCGCCTA TTACTTGGTT ACAAAGTCTG
TTCACTGCAA CCTCGGCGGT CACAGTGACT GGGCTAGTCG TTGTCGACAC TGGGACAGTA
TTTACGCCAT TTGGCCAAAT CGTCATCGCG CTTTTAATCC AATGCGGCGG GCTGGGGCTG
ATGACCTTTG CGATTGTTAC CCTTATCGCC CTTGGCGGTA AGATTGGCTT TTTACAGCAA
ACCGTCGCAA AAGAGGCTTT TAATCAAACC GATACTTCAA CATTAGTCTC GACTGCTAAG
GCCGTATTAC TGTTTTCGCT CTTGGTAGAA GCCATAGGCA TGTTGATTTT ATCAGTGCAT
TGGAGCAATG AACTCGGTTG GCAAACCAGC TTATTCCACG GTTTTTTCTA TACGATTAGC
GCCTTTAATA ACGCAGGTTT TGCCCTCAGT GCCGACAGCT TAATGCCCTA TGTGGCCGAT
CCTGTAATTA ACCTCACCAT CACAGGTTTA TTTATCATTG GCGGTTTAGG GTTTTCAGTC
TGGATTGACC TTCGCCGCAA TAAATGTTGG TCGAAATTGA CCGTCTACAG CCGAATGATG
ATTACAGGCA CCATACTGAT CAATGCCGTA GCAGTGATTG CTATTTACCT GATTGAGTAC
AACAACCCCA ATACTCTCGC GCCCTTAAGC GAACTCGGTA AATGGTTAGC CTCTTGGTTT
CAAGCCGTTA CCCCTCGCAC TGCTGGCTTT AATACCTTAG CCATTGACCA GCTCGAAGAT
GGCTCAACAC TACTTATGCT GGTATTGATG TTTATCGGCG GTGGCTCTCT CAGTACCGCC
AGCGGGATTA AGGTAGTCAC TTTTATGGTG TTGATTTTGG CAACTTATGG CTACTTGCGC
CGTGATGAAG CTGTCTACGT GTTTAAGCGG GAAATTCCCA AAGACACCAT TAGTAAGGCC
TTAGCCCTTA CCATGATCTC CATCGGCGTG ACTTGGCTCG CTATTTTTGC TTTAGTGTTA
ACTGAAAAAG CGCCGCTAGT CGATATTGTA TTTGAAGCGG TTTCAGCACT GGGCACTGTC
GGTTTATCAC GCGGTTTAAC AGGGAGTCTT TCAGATATGG GCCTAGGGAT CATTATCTTT
ATGATGTATA TGGGACGCCT AGGCCCACTG ATGCTGGCCT ACTTCCTCGC CAACCCAAGA
GTGAAAAAAC TGCGCTACGC AGAAACCAAA TTGGCGATTG GGTAA
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| Protein sequence | MVQWHPSIMA IEHHPRSDRK LFGAPPFILS VSFALLIILG TCLLKLPIAT EAPITWLQSL
FTATSAVTVT GLVVVDTGTV FTPFGQIVIA LLIQCGGLGL MTFAIVTLIA LGGKIGFLQQ
TVAKEAFNQT DTSTLVSTAK AVLLFSLLVE AIGMLILSVH WSNELGWQTS LFHGFFYTIS
AFNNAGFALS ADSLMPYVAD PVINLTITGL FIIGGLGFSV WIDLRRNKCW SKLTVYSRMM
ITGTILINAV AVIAIYLIEY NNPNTLAPLS ELGKWLASWF QAVTPRTAGF NTLAIDQLED
GSTLLMLVLM FIGGGSLSTA SGIKVVTFMV LILATYGYLR RDEAVYVFKR EIPKDTISKA
LALTMISIGV TWLAIFALVL TEKAPLVDIV FEAVSALGTV GLSRGLTGSL SDMGLGIIIF
MMYMGRLGPL MLAYFLANPR VKKLRYAETK LAIG
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