Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0036 |
Symbol | |
ID | 5078763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 44518 |
End bp | 44973 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640497156 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_001181571 |
Protein GI | 146291147 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTAA CACGCTATAC CGATTTTGGC GTTCGTACAC TTATGTATTT GGCTGTTCAG CCCGATAGGA CGACGCTGTT TAGAATTGCT GAAATTACCC AGGTATTTGA TTTATCACCT AATCATGTTT CTAAAATTGT GCATCATCTC GGTAAGCTAG GCTATTTAGA AACCATTCGA GGAAAAATGG GTGGCTTTCG TCTCGGCAAG CCAGCTTGCG AGATCAACTT AGGCCAATTA GTGCGAGTTC TTGAAAATTC ATTAGCACCA ATTGACTGTA GTAAACCTTA CTGCCGGTTT ACACCAGCCT GTAAGCTTAA AGGCGTCTTG GCGCATGCGG TTGATGCTTA TTTAAATGTG CTCGATCAAT ATAGTTTGCA AGATATAGTC AGTAATCGTG ATGAGCTGTT AGTTTTGCTG CCGGATTTGT CTATTTCTGT TTTACAGTTG GATTAG
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Protein sequence | MQLTRYTDFG VRTLMYLAVQ PDRTTLFRIA EITQVFDLSP NHVSKIVHHL GKLGYLETIR GKMGGFRLGK PACEINLGQL VRVLENSLAP IDCSKPYCRF TPACKLKGVL AHAVDAYLNV LDQYSLQDIV SNRDELLVLL PDLSISVLQL D
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