Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0032 |
Symbol | aroE |
ID | 5078755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 36358 |
End bp | 37206 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640497148 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001181567 |
Protein GI | 146291143 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00424938 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACA AATACGCAGT GTTTGGCAAT CCAATTAGCC ACAGTAAATC GCCGTTCATT CATGGACAAT TTGCTGCGCC CACCCAAGAG TTATTAACCT ATGAAGCCAT TCTTGCTCCG GTCGATGGTT TTGAAGCCTC ACTGACGGCG TTTTTCAATG CGGGCGGCAA GGGCGCGAAT GTGACAGTGC CTTTTAAGGA GCAAGCTTTT GCGCTGTGTG ACAGTCTCAG CCCAGAGGCC AAGCTTGCCG GCGCGGTAAA CACCTTAAGT TTATTGGCCG ATGGCACTAT TCGCGGTGAT AACACCGATG GTTTAGGGCT GGTGGCTGAT CTCATCGCTA ACTTAGGCAG CCTGCAAGGT AAGCGCGTGT TACTTATAGG TGCTGGTGGT GCGGCGCGCG GTTGTATTCT GCCATTATTA AATGCGGGAA TTGCGCAGCT AACGATTAGC AATCGCACTC ACACTAAGGC ACAGCTTCTG GTCGATATCT TTACTTCGGT GGATAACGGT GCTTTCGCAA ATAGAGTCAC CGCCGTAGAA ATGAATGAGC TTGTGGGCGA ATTCGATATC ATTATTAACT CAACTTCGGC TAGCCTTGCG GGCGAGTTGC CACCCGTGCC AGCGCATATC ATTACCCCTC AAACTGTCTG CTATGACATG ATGTATGGTG CCTCAGTTAC CGCTTTTAAC CAATGGGCGC TATCCCAAGG TGCAGCTAAG GTTATTGATG GACTCGGTAT GTTAGTCGGA CAAGCCGCTA AAAGCTTTAC CCTATGGCGA GGTGTTGAGC CAGATACTCA AGTGGTGTTG ACTCTTTTGC GGGACAAATT AAAGGCTGAG CCTAAGTAG
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Protein sequence | MTDKYAVFGN PISHSKSPFI HGQFAAPTQE LLTYEAILAP VDGFEASLTA FFNAGGKGAN VTVPFKEQAF ALCDSLSPEA KLAGAVNTLS LLADGTIRGD NTDGLGLVAD LIANLGSLQG KRVLLIGAGG AARGCILPLL NAGIAQLTIS NRTHTKAQLL VDIFTSVDNG AFANRVTAVE MNELVGEFDI IINSTSASLA GELPPVPAHI ITPQTVCYDM MYGASVTAFN QWALSQGAAK VIDGLGMLVG QAAKSFTLWR GVEPDTQVVL TLLRDKLKAE PK
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