Gene Sputcn32_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0029 
Symbol 
ID5078752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp34232 
End bp34798 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content47% 
IMG OID640497145 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_001181564 
Protein GI146291140 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.864856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAGC TGCACCCATC TGACATAAAA GATATTGTGC TTAACGGTGG TGTTATCGCT 
TATCCAACCG AGGCCGTTTA TGGCCTAGGT TGCGACCCAG ATAATGACAC TGCTATCCAA 
AAGTTATTGG CTGTAAAACA GCGCCCATGG CAAAAGGGAC TGATCTTAGT CGCCAGTGAT 
TTTCAGCAGC TTTTGGCTTA TGTTGATGAA TCGCAATTAA CTGCTGAGCA GCTCGAGTTT 
GCATTTTCCA AGTGGCCGGG GCCTTTTACC TTTGTCATGC CAATCAAAGC GCAGGTTTCA 
AAATACCTCT GTGGTGAATT TGACTCTATC GCAGTGCGAG TGTCGGCCCA TGCTGGAGTA 
CAAGCCCTGT GCCGCGCACT TAATAAACCT TTAGTGTCGA CCAGCGCTAA CCTTGCAGGT 
GAAGATCCCG CATTAACTGC CGCTGAAATC CTCGCCGATT TTACAGGTAA AATTGATGCA 
CTCGTATTAG GTGAACTTGG TGAGCAACGT CAGCCCTCGA CCATTATCGA TGCGCGAAGC 
GGTAAGATTT TACGAAATGG ACAATGA
 
Protein sequence
MLQLHPSDIK DIVLNGGVIA YPTEAVYGLG CDPDNDTAIQ KLLAVKQRPW QKGLILVASD 
FQQLLAYVDE SQLTAEQLEF AFSKWPGPFT FVMPIKAQVS KYLCGEFDSI AVRVSAHAGV 
QALCRALNKP LVSTSANLAG EDPALTAAEI LADFTGKIDA LVLGELGEQR QPSTIIDARS 
GKILRNGQ