Gene Sputcn32_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0028 
Symbol 
ID5081503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp33515 
End bp34084 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content44% 
IMG OID640497144 
ProductDNA topoisomerase type IA Zn finger domain-containing protein 
Protein accessionYP_001181563 
Protein GI146291139 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGT CTAAGATTGA TGAACAATTA TTTAGTGCCC ACGAACACGC ACTGGAAAAA 
GAATACGAAC TTTGCCCTGA ATGTGGCAGC GAGTTATCGG TCAAACATAG TAAGCACGGC 
GGTTTTATTG GCTGTAATAA TTACCCTAGC TGTAATTACA CTCGCCCCTT AGTGCAGCAC 
GAATCTATTG AAACTCAAGT GATTGACGGT TCTGTATGCC CAGAATGCGG TCACGAACTG 
GCGGTAAAGT CTGGGCGCTT TGGGATCTTT ATTGGTTGTA CTCAATATCC TAGCTGCACG 
CATATTGAAA AACAGGATCA AGGAGCTAAT AAACCAGATA TCCCTTGCCC AGAATGCAAA 
GCGGGTAAGC TTGAGCACAG AACGAGTCGC TTCGGAAAGA GTTTTTATGC CTGCAGTGCT 
TACCCTAAGT GCAAATTTAT TGTGAATTAT CCTCCGGTTG CTGAAGTTTG CCCGAGTTGT 
GGTTTTGGGA TCTTAGTCGA GCGTAAAGGT GCGGCAGGGA TGCGTTTAGA ATGCCCGCAA 
AAAAGCTGTA AATACAAAAG ACCACTTTAG
 
Protein sequence
MIMSKIDEQL FSAHEHALEK EYELCPECGS ELSVKHSKHG GFIGCNNYPS CNYTRPLVQH 
ESIETQVIDG SVCPECGHEL AVKSGRFGIF IGCTQYPSCT HIEKQDQGAN KPDIPCPECK 
AGKLEHRTSR FGKSFYACSA YPKCKFIVNY PPVAEVCPSC GFGILVERKG AAGMRLECPQ 
KSCKYKRPL