Gene Sputcn32_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0026 
Symbol 
ID5081501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp31903 
End bp32925 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID640497142 
ProductDNA protecting protein DprA 
Protein accessionYP_001181561 
Protein GI146291137 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATGG AAGTGGACGA CCTCAGGCAA AGGTTAGAGC ACGAGAGACA AGCGCTACCT 
TTATCTGATC ATCTGCTCCA TAGCCTTGTG ATTGATTATC AAAAAGTGGA TGCAGCCCTA 
GAATGGCAGC AACACTCCTC TGAGCATTAC CTGATTTGTT TTTCTGATCC GCTTTATCCA 
CCGTTGTTAA AGCAATTACC CGATCCGCCT TCCATCCTCT TTGTTAAGGG GTGTTTGGAG 
GCATTGGTGC CTCCTTACCT TGCTATTGTC GGAAGTCGTA ATGCTTCGCC TGGAGGCTTA 
CAGGTCGCTT ATCAACTAGC TACAGAGATG TCATCCCTTG GTTTTGGTAT TTGTAGTGGG 
ATGGCAATGG GCATTGATGG TGCTGCGCAT AAAGCCTGTG TTGACCATAA TAAAAGGACG 
ATTGCTGTAC TGGGAACAGG TATTGATATC GTGTACCCCC GCAGACATCG ACAGCTTTAT 
GAGAATATTC AGCAGCAAGG TTGTATACTC AGCGAGTTTT GGCCCGATAT AGGCCCCTTT 
GCGGGCAATT TTCCGAAACG AAATCGCATT ATTAGCGGTC TATCTTTAGG TACACTTGTG 
GTTGAAGCTT GTCGTAAAAG CGGATCTTTA ATCACAGCGA GGTTGGCGAT GGAGCAGGGG 
CGCGAAGTAT TTGCTGTTCC AGGCTCAATC TTAGGGGGTT ACCATCAAGG CTGTCATGAT 
TTATTACGTG ATGGGGCAAA ACTTGTGGAA ACCGCTGCCG ATATAGTGGA AGAGTTGGCA 
AGTTTAACGG CTTTCCACCT TGAAGAATTA AACTTATGCC ACCATATACA GAAGAGTGAC 
ATTTGCCATT TGCCATTTTC GTCTCTGTTA GCTAGTGTAG GTTATGAAAC TACAACAATT 
GATGCTGTAG TTGAACATAG TGGAAAAACG ATAGATCTGG TGTTAGAACA AATGCTTGAA 
CTTGAGTTGC AAGGTTGGGT AATAGCAGTA CCCGGTGGTT ACGTCAGAGT AAAGAGGAGC 
TAG
 
Protein sequence
MHMEVDDLRQ RLEHERQALP LSDHLLHSLV IDYQKVDAAL EWQQHSSEHY LICFSDPLYP 
PLLKQLPDPP SILFVKGCLE ALVPPYLAIV GSRNASPGGL QVAYQLATEM SSLGFGICSG 
MAMGIDGAAH KACVDHNKRT IAVLGTGIDI VYPRRHRQLY ENIQQQGCIL SEFWPDIGPF 
AGNFPKRNRI ISGLSLGTLV VEACRKSGSL ITARLAMEQG REVFAVPGSI LGGYHQGCHD 
LLRDGAKLVE TAADIVEELA SLTAFHLEEL NLCHHIQKSD ICHLPFSSLL ASVGYETTTI 
DAVVEHSGKT IDLVLEQMLE LELQGWVIAV PGGYVRVKRS