| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0020 |
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| Symbol | |
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| ID | 5081495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 24916 |
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| End bp | 26358 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640497136 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001181555 |
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| Protein GI | 146291131 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATT TCAGACCACT ACTGTTTATT TTAGGGCTGT TTCTTTCCAT GTTGACAGCC
TTTATGTTTA TCCCCCTGCT TCTGGCCGCT TTCAGTGGTG AAGAAACTGT GGGCTCTTTT
ATGGTATCCG CACTAGCAAC AGGGATCTGC GCCAGCCTTT GTTTACATAA TGGCCAAAGT
AAAACTATTC ACCTCAATAT CCGCGATATG TTTCTGCTGA CGAGCCTAAC ATGGTTAATC
GTCAGCCTAT TTGCGGCCAT GCCCTTTACC CTGTATCACG GTATTGGCTA TACGGATGCA
TTTTTTGAAA CCATGTCCGG TATTACCACG ACGGGTTCCA CCGTCCTTTC AGGCTTGGAT
ACCATGGACC ATAGCATTCT AATCTGGCGA TCATTACTAC AATGGCTTGG AGGTATTGGT
TTTATTGTTA TGGCCGTTGC AATTTTGCCT TTCTTAAACG TCGGAGGTAT GCGGCTATTT
CGTACTGAAT CTTCTGATTG GAGTGATAAA GCCGTACCCA GAACACAAAA TATGGCTAAG
CATTTATTTT TTATCTATAT TTTATTAACC ATTGTTTGTT GTGTTGCCTA CCACTTGGCT
GGTATGACTT GGTTTCAAGC AATTAACCAT GCGATGACCA CAATATCCAC TGGTGGTTAT
TCCACTTCAG ATAGCTCAAT GGCAGCTTTT TCAAACTCAG CACACTGGGT AGGTATTGTA
TTTATGGCGG CTGGTGGCTT GCCACTATTA CTGTTCGTAC ATACGATTCA ACAACGGAAT
CTTCATATTT GGAATGATGC ACAAGTTAGA GGATTTTTAT TCTTTCTGAC CTTTGTCTCC
TGCTCCATTG GATTTTGGCT CTGGCAAACC CGTGACATTG CGTTATCGGA TGCCTTACGC
TTATCCAGTT TTAATGTGGT TTCTGTTGTC ACAACAACAG GATATGGCTT AACTGATTAC
GGATCTTGGG GGGCTTTTGC TAATATCGCT TTTTTATTTT TAATGTTTGT GGGCGGTTGT
TCAGGCTCAA CATCGGGGGG AATTAAGATC TTCCGCTTTC AAATCGCAGG TGCCATTATG
CGCGAGCAAT TAAAGCAACA GTGTCATCCA AACGGTCTAT TTCGAGAGCG CTATAATAAT
CGCATTATCA GTGAAGATAT TGTCCGCTCG CTCATTACCT TCGTCTTACT GTTTATGCTC
GTCATTGTTG GATTATCAGT AATTTTAGTA CTTACAGGGC TCGATCCTAT GACTAGCTTT
ACCGGTGCCA TCACTGCCGT CACCAATGTA GGACCAGGTT TAGGCCCTAT TATTGGCCCT
GCGGGCAATT TCTCAACCTT GCCCGATGTC GCCAAATGGG CATTAGCACT CGGTATGTTA
CTTGGCCGCT TGGAAATCTT AACCGTGGCA GTATTATTCC ACCCAAGTTT CTGGAAATAC
TAA
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| Protein sequence | MLNFRPLLFI LGLFLSMLTA FMFIPLLLAA FSGEETVGSF MVSALATGIC ASLCLHNGQS
KTIHLNIRDM FLLTSLTWLI VSLFAAMPFT LYHGIGYTDA FFETMSGITT TGSTVLSGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAILP FLNVGGMRLF RTESSDWSDK AVPRTQNMAK
HLFFIYILLT IVCCVAYHLA GMTWFQAINH AMTTISTGGY STSDSSMAAF SNSAHWVGIV
FMAAGGLPLL LFVHTIQQRN LHIWNDAQVR GFLFFLTFVS CSIGFWLWQT RDIALSDALR
LSSFNVVSVV TTTGYGLTDY GSWGAFANIA FLFLMFVGGC SGSTSGGIKI FRFQIAGAIM
REQLKQQCHP NGLFRERYNN RIISEDIVRS LITFVLLFML VIVGLSVILV LTGLDPMTSF
TGAITAVTNV GPGLGPIIGP AGNFSTLPDV AKWALALGML LGRLEILTVA VLFHPSFWKY
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